RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 GATD1Q8NB37 220 aa12.49□□□□□ -0.41
MAP1LC3B-201ENST00000268607 IFI27L1Q96BM0 104 aa12.49□□□□□ -0.41
MAP1LC3B-201ENST00000268607 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
MAP1LC3B-201ENST00000268607 A6NJY4 79 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 IGLL5B9A064 214 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 IGLV1-47P01700 117 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 CRYGCP07315 174 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 HBDP02042 147 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 GAGE13Q4V321 117 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 C8orf86Q6ZUL3 223 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 ZNF479Q96JC4 524 aa12.48□□□□□ -0.41
MAP1LC3B-201ENST00000268607 C8orf31Q8N9H6 132 aa12.47□□□□□ -0.41
MAP1LC3B-201ENST00000268607 ZNF418Q8TF45 676 aaPredicted RBP12.47□□□□□ -0.41
MAP1LC3B-201ENST00000268607 RNF183Q96D59 192 aa12.47□□□□□ -0.41
MAP1LC3B-201ENST00000268607 FBXL15Q9H469 300 aa12.47□□□□□ -0.41
MAP1LC3B-201ENST00000268607 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 RPEQ96AT9 228 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 SLC25A39Q9BZJ4 359 aaPredicted RBP12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 A0A1B0GW15 77 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 MT-ATP8P03928 68 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 KLRD1Q13241 179 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 ORMDL3Q8N138 153 aa12.46□□□□□ -0.41
MAP1LC3B-201ENST00000268607 TEX15Q9BXT5 2789 aa12.46□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TRBV25-1A0A075B6N4 114 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 A0A1B0GWB2 263 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 AGRNO00468 2067 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PAX8Q06710 450 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CDIP1Q9H305 208 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PRO0461Q9UI25 63 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 APOMO95445 188 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CEND1Q8N111 149 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 SIGLEC9Q9Y336 463 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 U3KQK5 164 aa12.45□□□□□ -0.42
MAP1LC3B-201ENST00000268607 RPL27AP46776 148 aaKnown RBP12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PGPEP1Q9NXJ5 209 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 NPYP01303 97 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PLGLAQ15195 96 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 DTX2Q86UW9 622 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TMEM75Q8N9X5 138 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CYSLTR1Q9Y271 337 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 OR11H12B2RN74 326 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TIMM23O14925 209 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 KRTAP10-9P60411 292 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 Q6AWC8 147 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 PPP1R27Q86WC6 154 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 OR11H1Q8NG94 326 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 OR11H2Q8NH07 326 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ZNF502Q8TBZ5 544 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 HHLA3Q9XRX5 114 aa12.43□□□□□ -0.42
MAP1LC3B-201ENST00000268607 M0R3E3 92 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 FHL3Q13643 280 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 BPESC1Q9GZL8 116 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TRBV19A0A075B6N1 114 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CT45A10P0DMU9 189 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CKS2P33552 79 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 XGP55808 180 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 FOXI1Q12951 378 aa12.42□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 IGHV4-39P01824 125 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 RBP4P02753 201 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 NPIPB5A8MRT5 1133 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CRYGBP07316 175 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 LCNL1Q6ZST4 164 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ZFP36P26651 326 aaKnown RBP12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 ACANP16112 2415 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CNIH1O95406 144 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 Q6ZUT4 128 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 CCL19Q99731 98 aa12.4□□□□□ -0.42
MAP1LC3B-201ENST00000268607 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.43
MAP1LC3B-201ENST00000268607 SONP18583 2426 aaKnown RBP12.39□□□□□ -0.43
MAP1LC3B-201ENST00000268607 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms