RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 FOXC1Q12948 553 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 SPOCK3Q9BQ16 436 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
RTN1-201ENST00000267484 Q8N6K4 173 aa13.02□□□□□ -0.32
RTN1-201ENST00000267484 Q8N9W7 124 aa13.02□□□□□ -0.32
RTN1-201ENST00000267484 MSRB2Q9Y3D2 182 aa13.02□□□□□ -0.32
RTN1-201ENST00000267484 BUB3O43684 328 aa13.02□□□□□ -0.33
RTN1-201ENST00000267484 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.33
RTN1-201ENST00000267484 A0A1W2PPM0 123 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 M0R1W7 72 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 TMEM8BA6NDV4 472 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 COL12A1Q99715 3063 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 VPS13CQ709C8 3753 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 TRAV40A0A0B4J280 105 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 COL25A1Q9BXS0 654 aaPredicted RBP13.01□□□□□ -0.33
RTN1-201ENST00000267484 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
RTN1-201ENST00000267484 IGKCP01834 107 aa13□□□□□ -0.33
RTN1-201ENST00000267484 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
RTN1-201ENST00000267484 TMEM190Q8WZ59 177 aa13□□□□□ -0.33
RTN1-201ENST00000267484 SIVA1O15304 175 aa13□□□□□ -0.33
RTN1-201ENST00000267484 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
RTN1-201ENST00000267484 CHAC1Q9BUX1 264 aa13□□□□□ -0.33
RTN1-201ENST00000267484 CSTL1Q9H114 145 aa13□□□□□ -0.33
RTN1-201ENST00000267484 CLPSL1A2RUU4 121 aa13□□□□□ -0.33
RTN1-201ENST00000267484 EFNA4P52798 201 aa13□□□□□ -0.33
RTN1-201ENST00000267484 CNFNQ9BYD5 112 aa13□□□□□ -0.33
RTN1-201ENST00000267484 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
RTN1-201ENST00000267484 AGRNO00468 2067 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 MRPL35Q9NZE8 188 aaKnown RBP12.99□□□□□ -0.33
RTN1-201ENST00000267484 IGF1P05019 195 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 CCDC140Q96MF4 163 aa12.99□□□□□ -0.33
RTN1-201ENST00000267484 NXT2Q9NPJ8 142 aaKnown RBP12.99□□□□□ -0.33
RTN1-201ENST00000267484 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 DEFB1P60022 68 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 NHP2Q9NX24 153 aaKnown RBP12.98□□□□□ -0.33
RTN1-201ENST00000267484 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 KLK15Q9H2R5 256 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 SMIM13P0DJ93 91 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
RTN1-201ENST00000267484 IGLV2-18A0A075B6J9 118 aa12.97□□□□□ -0.33
RTN1-201ENST00000267484 FABP2P12104 132 aa12.97□□□□□ -0.33
RTN1-201ENST00000267484 IGHV7-4-1A0A0J9YVY3 117 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 Q8N8P6 123 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 H3BVH4 76 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 DPM2O94777 84 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 PRR9Q5T870 116 aa12.96□□□□□ -0.33
RTN1-201ENST00000267484 A0A1W2PPR1 153 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 TMEM78Q5T7P6 136 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 G3V4G9 280 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 GOSR1O95249 250 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 RPL24P83731 157 aaKnown RBP12.95□□□□□ -0.34
RTN1-201ENST00000267484 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 NRACQ8N912 160 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 EBI3Q14213 229 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
RTN1-201ENST00000267484 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
RTN1-201ENST00000267484 IGHV3OR16-10A0A075B7F0 116 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 K7ENP7 123 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 C11orf71Q6IPW1 123 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 LINC01546A6NGU7 62 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 SAA4P35542 130 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 SRSF2Q01130 221 aaKnown RBP12.94□□□□□ -0.34
RTN1-201ENST00000267484 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
RTN1-201ENST00000267484 AJUBAQ96IF1 538 aa12.93□□□□□ -0.34
RTN1-201ENST00000267484 LAGE3Q14657 143 aa12.93□□□□□ -0.34
RTN1-201ENST00000267484 MTURNQ8N3F0 131 aa12.93□□□□□ -0.34
RTN1-201ENST00000267484 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
RTN1-201ENST00000267484 SIRPDQ9H106 197 aa12.93□□□□□ -0.34
RTN1-201ENST00000267484 HIVEP3Q5T1R4 2406 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 M0R381 172 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 MINOS1Q5TGZ0 78 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 LCNL1Q6ZST4 164 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 PHLDA1Q8WV24 401 aaPredicted RBP12.92□□□□□ -0.34
RTN1-201ENST00000267484 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 MINOS1-NBL1R4GNA1 71 aa12.92□□□□□ -0.34
RTN1-201ENST00000267484 TEX48A0A1B0GUV7 120 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 FBXL19-AS1Q494R0 122 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 CEND1Q8N111 149 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 C20orf173Q96LM9 149 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 ATP5LO75964 103 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 OR5A1Q8NGJ0 315 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 METTL26Q96S19 204 aa12.91□□□□□ -0.34
RTN1-201ENST00000267484 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
RTN1-201ENST00000267484 HIGD1BQ9P298 99 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms