RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
SHANK3-201ENST00000262795 NCOR1O75376 2440 aa12.64□□□□□ -0.39
SHANK3-201ENST00000262795 KLF2Q9Y5W3 355 aaPredicted RBP12.64□□□□□ -0.39
SHANK3-201ENST00000262795 CHCHD1Q96BP2 118 aaKnown RBP12.63□□□□□ -0.39
SHANK3-201ENST00000262795 NTF4P34130 210 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 CD5LO43866 347 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 CRLF1O75462 422 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 GYPEP15421 78 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 TMEM238C9JI98 176 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 BLCAPP62952 87 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 SPART-AS1P0CW21 52 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 AMN1Q8IY45 258 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 DENND4AQ7Z401 1863 aa12.63□□□□□ -0.39
SHANK3-201ENST00000262795 UBE2AP49459 152 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 PNRC2Q9NPJ4 139 aaKnown RBP12.62□□□□□ -0.39
SHANK3-201ENST00000262795 ICOSQ9Y6W8 199 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 KIF26AQ9ULI4 1882 aaPredicted RBP12.62□□□□□ -0.39
SHANK3-201ENST00000262795 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 LY6G6CO95867 125 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 BAALCQ8WXS3 180 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 HLA-DRB4P13762 266 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 ASPHD1Q5U4P2 390 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 HLA-DRB4X5D2U9 266 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 MMP23AO75900 390 aa12.62□□□□□ -0.39
SHANK3-201ENST00000262795 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
SHANK3-201ENST00000262795 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
SHANK3-201ENST00000262795 LOXP28300 417 aaPredicted RBP12.61□□□□□ -0.39
SHANK3-201ENST00000262795 MRPL27Q9P0M9 148 aaKnown RBP12.61□□□□□ -0.39
SHANK3-201ENST00000262795 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
SHANK3-201ENST00000262795 ELANEP08246 267 aa12.61□□□□□ -0.39
SHANK3-201ENST00000262795 ARTNQ5T4W7 220 aa12.61□□□□□ -0.39
SHANK3-201ENST00000262795 Q6ZR03 302 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 NDUFA4O00483 81 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 PPBPP02775 128 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 ZNF503-AS2A6NEH8 195 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 LYPD3O95274 346 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 CDPF1Q6NVV7 123 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
SHANK3-201ENST00000262795 HAMPP81172 84 aa12.6□□□□□ -0.39
SHANK3-201ENST00000262795 J3QRE1 110 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 C3orf79P0CE67 100 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
SHANK3-201ENST00000262795 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 B5MCH6 92 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 I3L3M4 83 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 LY6G5BQ8NDX9 201 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 DOCK11Q5JSL3 2073 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 A8MWP6 167 aa12.59□□□□□ -0.39
SHANK3-201ENST00000262795 TRBV20-1A0A075B6N2 111 aa12.58□□□□□ -0.4
SHANK3-201ENST00000262795 C9JQL5 133 aa12.58□□□□□ -0.4
SHANK3-201ENST00000262795 SPRNQ5BIV9 151 aa12.58□□□□□ -0.4
SHANK3-201ENST00000262795 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
SHANK3-201ENST00000262795 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
SHANK3-201ENST00000262795 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 A0A087WW49 117 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 RIF1Q5UIP0 2472 aaKnown RBP12.57□□□□□ -0.4
SHANK3-201ENST00000262795 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
SHANK3-201ENST00000262795 GPHB5Q86YW7 130 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
SHANK3-201ENST00000262795 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
SHANK3-201ENST00000262795 IGHV1-24A0A0C4DH33 117 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 NPBQ8NG41 125 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
SHANK3-201ENST00000262795 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
SHANK3-201ENST00000262795 CENPVL3A0A0U1RRI6 287 aa12.56□□□□□ -0.4
SHANK3-201ENST00000262795 HLA-DMBP28068 263 aa12.56□□□□□ -0.4
SHANK3-201ENST00000262795 MORN5Q5VZ52 161 aa12.56□□□□□ -0.4
SHANK3-201ENST00000262795 C17orf58Q2M2W7 97 aa12.56□□□□□ -0.4
SHANK3-201ENST00000262795 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 TMEM258P61165 79 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 CAMK2N2Q96S95 79 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 NLRC5Q86WI3 1866 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 SLX1AQ9BQ83 275 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 GNRH2O43555 120 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 NCKAP5O14513 1909 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
SHANK3-201ENST00000262795 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 RHODO00212 210 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 IGLL1P15814 213 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 STPG4Q8N801 248 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 CRYGCP07315 174 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 BRK1Q8WUW1 75 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 RHOHQ15669 191 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 Q6ZVH6 145 aa12.54□□□□□ -0.4
SHANK3-201ENST00000262795 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms