RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 RASL11AQ6T310 242 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 LYPD1Q8N2G4 141 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 IMMP2LQ96T52 175 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PHLDA3Q9Y5J5 127 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A096LNJ9 63 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 CX3CL1P78423 397 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 LOXL1Q08397 574 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 C1orf122Q6ZSJ8 110 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 SMPXQ9UHP9 88 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 F2Z2F3 143 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 NBR2O15453 112 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PRSS1P07477 247 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PROK1P58294 105 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 FXYD3Q14802 87 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PRR27Q6MZM9 219 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 CFAP161Q6P656 301 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 TEX38Q6PEX7 206 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 Q8N976 141 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PRADC1Q9BSG0 188 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 CYP2G1PQ6ZSU1 146 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 FXYD5Q96DB9 178 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 EDA2RQ9HAV5 297 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 LINC00315P59091 139 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 AMTNQ6UX39 209 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 Q6YL49 198 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 PARD6GQ9BYG4 376 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 NDUFB8O95169 186 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SMIM6P0DI80 62 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 PSMB2P49721 201 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 DEFB113Q30KQ7 82 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 TPTE2P1Q5T6R2 138 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 CSNK1G2-AS1Q8NCQ2 148 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 TNFRSF18Q9Y5U5 241 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 WI2-2373I1.2A0A1W2PRP0 233 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 OR2J3O76001 311 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 TRGV3P03979 118 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 GPX1P07203 203 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 MGPP08493 103 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 RHOGP84095 191 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SLAQ13239 276 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM167AQ8TBQ9 72 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 DCANP1Q8TF63 244 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SFRP2Q96HF1 295 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 ATP6V0BQ99437 205 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 LAMTOR2Q9Y2Q5 125 aa4.19□□□□□ -1.74
TOPBP1-201ENST00000260810 SLC25A20O43772 301 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 KRTAP10-11P60412 298 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 BATFQ16520 125 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 OR5AU1Q8NGC0 362 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 OR10AG1Q8NH19 301 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 BLNKQ8WV28 456 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 TRAV21A0A0B4J279 112 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 ATP5L2Q7Z4Y8 100 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 RHOVQ96L33 236 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 C21orf62Q9NYP8 219 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 CST7O76096 145 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 SNRPCP09234 159 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 ZNF491Q8N8L2 437 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 CYB561D1Q8N8Q1 229 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 OR8A1Q8NGG7 326 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 SSMEM1Q8WWF3 244 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM158Q8WZ71 300 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 FUT9Q9Y231 359 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 M0R3E3 92 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 RPL35P42766 123 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 PRCDQ00LT1 54 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 LCN12Q6JVE5 192 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 STHQ8IWL8 128 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 OR1P1Q8NH06 330 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 VGLL1Q99990 258 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 SPANXCQ9NY87 97 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 WDR83OSQ9Y284 106 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 LY96Q9Y6Y9 160 aa4.18□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A1W2PRD5 423 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A1W2PRF3 423 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 A0A1W2PRM7 423 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 APOMO95445 188 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 SLC25A22Q9H936 323 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 C5orf52A6NGY3 159 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 COLCA2A8K830 154 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 ATP6V0E1O15342 81 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 LY6G6DO95868 133 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 CRPP02741 224 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 ATP6V0CP27449 155 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 ORMDL2Q53FV1 153 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 MORN3Q6PF18 240 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 THAP8Q8NA92 274 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 PEF1Q9UBV8 284 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 TCRBV4S1A1TA0A5B7 111 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 APOC4P55056 127 aa4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-201ENST00000260810 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms