RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 K7EQG2 157 aa9.93□□□□□ -0.82
SLIRP-201ENST00000238688 OR2D3Q8NGH3 330 aa9.93□□□□□ -0.82
SLIRP-201ENST00000238688 NEU1Q99519 415 aa9.93□□□□□ -0.82
SLIRP-201ENST00000238688 VGLL1Q99990 258 aa9.93□□□□□ -0.82
SLIRP-201ENST00000238688 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 PHOX2AO14813 284 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 TRGC2P03986 189 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 CRISP2P16562 243 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 NSUN5P1Q3KNT7 163 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 NDUFA11Q86Y39 141 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 RNF182Q8N6D2 247 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 BORCS7Q96B45 105 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 MS4A6AQ9H2W1 248 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
SLIRP-201ENST00000238688 ZNF705FA8MVS1 300 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-201ENST00000238688 CCL24O00175 119 aa9.91□□□□□ -0.82
SLIRP-201ENST00000238688 DUSP14O95147 198 aaKnown RBP9.91□□□□□ -0.82
SLIRP-201ENST00000238688 CMC4P56277 68 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-201ENST00000238688 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
SLIRP-201ENST00000238688 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
SLIRP-201ENST00000238688 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
SLIRP-201ENST00000238688 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
SLIRP-201ENST00000238688 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-201ENST00000238688 LOC105371267A0A1B0GV96 52 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 TMEM189A5PLL7 270 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 F2Z2F3 143 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 SH2D1AO60880 128 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HLA-DMBP28068 263 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HBBP68871 147 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 RIGQ13278 110 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-201ENST00000238688 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BHQ93079 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 FAM19A4Q96LR4 140 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BNQ99877 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 HIST1H2BMQ99879 126 aa9.9□□□□□ -0.82
SLIRP-201ENST00000238688 A0A1B0GUT8 65 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 C5orf52A6NGY3 159 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 OR4C46A6NHA9 309 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 UBE2CO00762 179 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 CSN3P07498 182 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 TSPOP30536 169 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 SLURP1P55000 103 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 FOXI2Q6ZQN5 318 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 GATD1Q8NB37 220 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 DYNLRB2Q8TF09 96 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 RAX2Q96IS3 184 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 C20orf173Q96LM9 149 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
SLIRP-201ENST00000238688 TRAV21A0A0B4J279 112 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 CTRLP40313 264 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 LEPP41159 167 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 CRIP1P50238 77 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 IGFL4Q6B9Z1 124 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 Q8TAT8 98 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 FRZBQ92765 325 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 DLX4Q92988 240 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-201ENST00000238688 C8orf49Q96NF6 230 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 FAM110AQ9BQ89 295 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
SLIRP-201ENST00000238688 A8MTW9 85 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 TRGC1P0CF51 173 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 MED14OSP0DP75 135 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 FABP9Q0Z7S8 132 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 DEFB136Q30KP8 78 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 TMEM136Q6ZRR5 245 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 GTSF1Q8WW33 167 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 GPR61Q9BZJ8 451 aa9.87□□□□□ -0.83
SLIRP-201ENST00000238688 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
SLIRP-201ENST00000238688 A0A0J9YX75 114 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 A0A1W2PRX2 142 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 KLLNB2CW77 178 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 CA1P00915 261 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-201ENST00000238688 TCL1AP56279 114 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 ERCC8Q13216 396 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 DNLZQ5SXM8 178 aa9.86□□□□□ -0.83
SLIRP-201ENST00000238688 IGLC6P0CF74 106 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 HOXA5P20719 270 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 OR10J3Q5JRS4 329 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms