RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 HIST1H2BOP23527 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BBP33778 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 TAGLN2P37802 199 aaKnown RBP9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BDP58876 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BCP62807 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H1AQ02539 215 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST2H2BEQ16778 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-201ENST00000230480 SSX7Q7RTT5 188 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 S100A7AQ86SG5 101 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 OR2G3Q8NGZ4 309 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BHQ93079 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 IGF2BP2-AS1Q96M15 143 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BNQ99877 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 HIST1H2BMQ99879 126 aa9.83□□□□□ -0.84
VEGFA-201ENST00000230480 MRPL32Q9BYC8 188 aaKnown RBP9.83□□□□□ -0.84
VEGFA-201ENST00000230480 NPIPB6E9PJ23 425 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 DUSP14O95147 198 aaKnown RBP9.82□□□□□ -0.84
VEGFA-201ENST00000230480 IFNA5P01569 189 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 AZU1P20160 251 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 NUTF2P61970 127 aaKnown RBP9.82□□□□□ -0.84
VEGFA-201ENST00000230480 ERCC8Q13216 396 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 C12orf74Q32Q52 190 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 MRPL52Q86TS9 123 aaKnown RBP9.82□□□□□ -0.84
VEGFA-201ENST00000230480 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 FAM213BQ8TBF2 198 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 SCGB1C1Q8TD33 95 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 GNPNAT1Q96EK6 184 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-201ENST00000230480 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 C1QTNF4Q9BXJ3 329 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 AGPAT4-IT1Q9H0P7 198 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 RNF24Q9Y225 148 aa9.82□□□□□ -0.84
VEGFA-201ENST00000230480 TRAV1-1A0A0B4J248 108 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 LCE6AA0A183 80 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 C17orf112F2Z3M2 114 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 PMS2P11Q13670 270 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 PDE6HQ13956 83 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 JOSD1Q15040 202 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-201ENST00000230480 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-201ENST00000230480 Q6ZQT7 251 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 BLNKQ8WV28 456 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
VEGFA-201ENST00000230480 PSMG3Q9BT73 122 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-201ENST00000230480 NDUFAF3Q9BU61 184 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 PAXXQ9BUH6 204 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 ACTR3CQ9C0K3 210 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-201ENST00000230480 CTDSP1Q9GZU7 261 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 DNAH10Q8IVF4 4471 aa9.81□□□□□ -0.84
VEGFA-201ENST00000230480 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
VEGFA-201ENST00000230480 ICAM4Q14773 271 aa9.8□□□□□ -0.84
VEGFA-201ENST00000230480 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
VEGFA-201ENST00000230480 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
VEGFA-201ENST00000230480 PHLDA1Q8WV24 401 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-201ENST00000230480 VGLL1Q99990 258 aa9.8□□□□□ -0.84
VEGFA-201ENST00000230480 KCNIP2Q9NS61 270 aa9.8□□□□□ -0.84
VEGFA-201ENST00000230480 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 ZNF705GA8MUZ8 300 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-201ENST00000230480 HMGB3O15347 200 aaKnown RBP9.79□□□□□ -0.84
VEGFA-201ENST00000230480 GCGP01275 180 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 CXCL1P09341 107 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 AKR1C8PQ5T2L2 129 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 PRR9Q5T870 116 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 FAM210BQ96KR6 192 aa9.79□□□□□ -0.84
VEGFA-201ENST00000230480 PACRGQ96M98 296 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-201ENST00000230480 IGKV2-40A0A087WW87 121 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-201ENST00000230480 LOC102723971A0A1B0GUV8 181 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 SMIM9A6NGZ8 99 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-201ENST00000230480 TRGC1P0CF51 173 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 STAG3L2P0CL84 134 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 STAG3L3P0CL85 134 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 RHOBP62745 196 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 GFI1BQ5VTD9 330 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 Q6ZTC4 211 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
VEGFA-201ENST00000230480 TCAPO15273 167 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 CDKN1BP46527 198 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 RANP62826 216 aaKnown RBP9.77□□□□□ -0.85
VEGFA-201ENST00000230480 ACOT6Q3I5F7 207 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-201ENST00000230480 ZFAND2AQ8N6M9 145 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 ODF3Q96PU9 254 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 HIST1H2BLQ99880 126 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 Q9H3A6 140 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 DKK2Q9UBU2 259 aa9.77□□□□□ -0.85
VEGFA-201ENST00000230480 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
VEGFA-201ENST00000230480 KLLNB2CW77 178 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 PHOX2AO14813 284 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 OR7C2O60412 319 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 ZNF324O75467 553 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-201ENST00000230480 AMBPP02760 352 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 TRGC2P03986 189 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 FABP4P15090 132 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 SERF2P84101 59 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms