RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.66
HCFC2-201ENST00000229330 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.66
HCFC2-201ENST00000229330 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.66
HCFC2-201ENST00000229330 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
HCFC2-201ENST00000229330 DUX4L9Q6RFH8 374 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 MBD3L4A6NDZ8 208 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 MBD3L3A6NE82 208 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 MBD3L5A6NJ08 208 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 MBD3L2Q8NHZ7 208 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 K7EMI3 77 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 GATA4P43694 442 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
HCFC2-201ENST00000229330 C17orf77Q96MU5 243 aa10.95□□□□□ -0.66
HCFC2-201ENST00000229330 THBDP07204 575 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 C1orf159Q96HA4 380 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 CHCHD5Q9BSY4 110 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 YLPM1P49750 1951 aaKnown RBP10.94□□□□□ -0.66
HCFC2-201ENST00000229330 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 M0R1W7 72 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 Q9UFV3 132 aa10.94□□□□□ -0.66
HCFC2-201ENST00000229330 TRAV13-1A0A0B4J241 112 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 RPL36AP83881 106 aaKnown RBP10.93□□□□□ -0.66
HCFC2-201ENST00000229330 ODF3L1Q8IXM7 274 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 RPL36ALQ969Q0 106 aaKnown RBP10.93□□□□□ -0.66
HCFC2-201ENST00000229330 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 I3L3M4 83 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 ZNF415Q09FC8 603 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 PLXNB3Q9ULL4 1909 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 CTRLP40313 264 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 STHQ8IWL8 128 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 Q8TCH9 128 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 KRTAP27-1Q3LI81 207 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 JPT2Q9H910 190 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 KMT2EQ8IZD2 1858 aa10.93□□□□□ -0.66
HCFC2-201ENST00000229330 FAM167A-AS1Q96KT0 104 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 TRGV4A0A0C4DH28 118 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 GATA1P15976 413 aaPredicted RBP10.92□□□□□ -0.66
HCFC2-201ENST00000229330 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 GP9P14770 177 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 ZNF491Q8N8L2 437 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 TMEM126AQ9H061 195 aa10.92□□□□□ -0.66
HCFC2-201ENST00000229330 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 DKK1O94907 266 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 PATE2Q6UY27 113 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 NUP210Q8TEM1 1887 aaPredicted RBP10.91□□□□□ -0.66
HCFC2-201ENST00000229330 TCTEX1D4Q5JR98 221 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 IGLV2-14P01704 120 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 ACYP1P07311 99 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
HCFC2-201ENST00000229330 SPTAN1Q13813 2472 aaKnown RBP10.9□□□□□ -0.66
HCFC2-201ENST00000229330 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
HCFC2-201ENST00000229330 DIAPH2-AS1Q14236 149 aa10.9□□□□□ -0.66
HCFC2-201ENST00000229330 PKDREJQ9NTG1 2253 aa10.9□□□□□ -0.67
HCFC2-201ENST00000229330 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 EP400Q96L91 3159 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 COL4A3Q01955 1670 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 WNK2Q9Y3S1 2297 aa10.89□□□□□ -0.67
HCFC2-201ENST00000229330 CR1LQ2VPA4 569 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 CFHR4Q92496 578 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 MSRB2Q9Y3D2 182 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 UBL5Q9BZL1 73 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 KIAA1671Q9BY89 1806 aa10.88□□□□□ -0.67
HCFC2-201ENST00000229330 DENND4CQ5VZ89 1909 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 LOXP28300 417 aaPredicted RBP10.87□□□□□ -0.67
HCFC2-201ENST00000229330 RNF183Q96D59 192 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 PRSS47A8MTI9 375 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 COL8A2P25067 703 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 DAZ1Q9NQZ3 744 aaKnown RBP10.87□□□□□ -0.67
HCFC2-201ENST00000229330 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 PLA2G5P39877 138 aa10.87□□□□□ -0.67
HCFC2-201ENST00000229330 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 MSRB1Q9NZV6 116 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 ODF1Q14990 250 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 DOCK7Q96N67 2140 aa10.86□□□□□ -0.67
HCFC2-201ENST00000229330 DTX1Q86Y01 620 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms