RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 ODF1Q14990 250 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 TMEM78Q5T7P6 136 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 CCDC144NLQ6NUI1 221 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 Q6ZQT7 251 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 NPBQ8NG41 125 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 LINC00527Q9UJ94 153 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 CREBBPQ92793 2442 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 MTURNQ8N3F0 131 aa13.33□□□□□ -0.28
H2AFV-201ENST00000222690 EFNA4P52798 201 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 UFSP1Q6NVU6 142 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 OR11H6Q8NGC7 330 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
H2AFV-201ENST00000222690 G3V318 75 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 DPM2O94777 84 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 PRTN3P24158 256 aa13.32□□□□□ -0.28
H2AFV-201ENST00000222690 GOSR1O95249 250 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 IGHG4P01861 327 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 TTC9CQ8N5M4 171 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 LCNL1Q6ZST4 164 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 AGRNO00468 2067 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 TRBV25-1A0A075B6N4 114 aa13.31□□□□□ -0.28
H2AFV-201ENST00000222690 IGHV7-81A0A0B4J1V7 117 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 H3BVH4 76 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 M0R381 172 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
H2AFV-201ENST00000222690 VKORC1Q9BQB6 163 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 SIVA1O15304 175 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
H2AFV-201ENST00000222690 HIST1H4GQ99525 98 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 IGKV3D-20A0A0C4DH25 116 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 PAX8Q06710 450 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 LY6G5BQ8NDX9 201 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 C11orf21Q9P2W6 132 aa13.29□□□□□ -0.28
H2AFV-201ENST00000222690 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
H2AFV-201ENST00000222690 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
H2AFV-201ENST00000222690 NPFFR1Q9GZQ6 430 aa13.28□□□□□ -0.28
H2AFV-201ENST00000222690 HHLA3Q9XRX5 114 aa13.28□□□□□ -0.28
H2AFV-201ENST00000222690 C16orf92Q96LL3 132 aa13.27□□□□□ -0.28
H2AFV-201ENST00000222690 TEX48A0A1B0GUV7 120 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 BUB3O43684 328 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 CDSNQ15517 529 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 AMTNQ6UX39 209 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 NCOR2Q9Y618 2525 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 G3V4G9 280 aa13.27□□□□□ -0.29
H2AFV-201ENST00000222690 LAGE3Q14657 143 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 ATP5LO75964 103 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 MGPP08493 103 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 DEFB1P60022 68 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 Q8N8P6 123 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 M0R1W7 72 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
H2AFV-201ENST00000222690 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 METTL26Q96S19 204 aa13.26□□□□□ -0.29
H2AFV-201ENST00000222690 TMEM219Q86XT9 240 aa13.25□□□□□ -0.29
H2AFV-201ENST00000222690 MAPKAPK5-AS1Q8N8E1 139 aa13.25□□□□□ -0.29
H2AFV-201ENST00000222690 ODF3BA8MYP8 253 aa13.25□□□□□ -0.29
H2AFV-201ENST00000222690 Q8N9W7 124 aa13.25□□□□□ -0.29
H2AFV-201ENST00000222690 LINC01559Q495D7 138 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 GTSF1LQ9H1H1 148 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
H2AFV-201ENST00000222690 TMEM238C9JI98 176 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 H3BMG7 143 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
H2AFV-201ENST00000222690 CEND1Q8N111 149 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 ZNF48Q96MX3 618 aaPredicted RBP13.23□□□□□ -0.29
H2AFV-201ENST00000222690 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 IGF1P05019 195 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 MSRB2Q9Y3D2 182 aa13.23□□□□□ -0.29
H2AFV-201ENST00000222690 CHD8Q9HCK8 2581 aa13.22□□□□□ -0.29
H2AFV-201ENST00000222690 SCGB3A1Q96QR1 104 aa13.22□□□□□ -0.29
H2AFV-201ENST00000222690 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
H2AFV-201ENST00000222690 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
H2AFV-201ENST00000222690 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.29
H2AFV-201ENST00000222690 WFDC2Q14508 124 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 C14orf178Q8N769 122 aaPredicted RBP13.21□□□□□ -0.29
H2AFV-201ENST00000222690 HRNRQ86YZ3 2850 aaPredicted RBP13.21□□□□□ -0.29
H2AFV-201ENST00000222690 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 SAA4P35542 130 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 ETDBQ3ZM63 59 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
H2AFV-201ENST00000222690 CSPG4Q6UVK1 2322 aa13.21□□□□□ -0.3
H2AFV-201ENST00000222690 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.3
H2AFV-201ENST00000222690 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.3
H2AFV-201ENST00000222690 ZFAND3Q9H8U3 227 aa13.21□□□□□ -0.3
H2AFV-201ENST00000222690 RAB9AP51151 201 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 CCDC140Q96MF4 163 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 COL12A1Q99715 3063 aa13.2□□□□□ -0.3
H2AFV-201ENST00000222690 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms