RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Nbl1Q61477 178 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 AdoQ6PDY2 256 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r72Q8K3N7 306 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Cd226Q8K4F0 333 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Slc16a4Q8R0M8 500 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Asb13Q8VBX0 278 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr470Q8VF65 314 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr530Q8VFE8 307 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hoga1Q9DCU9 321 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ppp1r1aQ9ERT9 171 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Syt6Q9R0N8 511 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tenm1Q9WTS4 2731 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1438-ps1A0A140LHS9 319 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rab33bO35963 229 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 P01798 113 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 P01806 116 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Sult4a1P63046 284 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Snai2P97469 269 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rbp4Q00724 201 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1209Q3SXJ3 310 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tmem18Q3TUD9 140 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Mcrip1Q3UGS4 97 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Slc38a11Q3USY0 453 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm12258Q5NC63 627 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Scgb2b24Q7M747 112 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr305Q7TS02 319 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rnf182Q8C432 247 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Slc1a7Q8JZR4 559 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ppp1r14aQ91VC7 147 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Mrpl18Q9CQL5 180 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Pdzd11Q9CZG9 140 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ube2cQ9D1C1 179 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Cd200r1Q9ES57 326 aa6.79□□□□□ -1.32
Trim39-205ENSMUST00000173369 Scgb1b12A0A087WP21 93 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm20815J3KMI0 227 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm20914J3QME2 227 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Kcns2O35174 477 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 TfpiO54819 306 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hist1h1dP43277 221 aaKnown RBP6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 C1qtnf9Q4ZJN1 333 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gnb3Q61011 340 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm21292Q78EE2 227 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr657Q7TRP7 319 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Saxo2Q8BQB6 394 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Mpc2Q9D023 127 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r54Q9EPB8 315 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gpx2Q9JHC0 190 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tomm40Q9QYA2 361 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1326-ps1A0A140T8J7 311 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr588-ps1A0A1B0GSZ2 313 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr685A0A1L1SVG7 331 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r232A2RTT5 351 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1406E9Q8X1 310 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tnfaip6O08859 275 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 P01660 111 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Lynx1P0DP60 116 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Meox1P32442 253 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 KncnQ307W7 124 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 EcscrQ3TZW0 214 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1173Q7TR24 312 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Cmtm4Q8CJ61 208 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1030Q8VFL5 318 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 RhebQ921J2 184 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Znf281Q99LI5 893 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ccdc167Q9D162 97 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Fbxo24Q9D417 589 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tex37Q9DAG4 180 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tax1bp3Q9DBG9 124 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Kcnip3Q9QXT8 256 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rab25Q9WTL2 213 aa6.78□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ube2dnl1A2AFH1 155 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Serf1O88892 62 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 P01658 132 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 HbzP06467 142 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Ercc1P07903 298 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Fgf2P15655 154 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Shisa3Q3UPR0 238 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr1362Q5SZZ8 308 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Dnd1Q6VY05 352 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Znrd1Q791N7 123 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr1283Q7TQY4 305 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr1168Q7TR25 312 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Harbi1Q8BR93 349 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 4930451G09RikQ8C5G4 195 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Phf13Q8K2W6 296 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Gtf2h5Q8K2X8 71 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Mic13Q8R404 119 aaKnown RBP6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr1323Q8VF35 309 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr720Q8VF37 316 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr830Q8VFJ5 315 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Cbln3Q9JHG0 197 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 GzmaP11032 260 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Scd2P13011 358 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 CrpP14847 225 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Trav3-3Q5R1C3 114 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 LgalslbQ7TPX9 165 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Lrrc75aQ7TSF4 339 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Dhrs7cQ8CHS7 311 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Pitpnc1Q8K4R4 332 aa6.77□□□□□ -1.33
Trim39-205ENSMUST00000173369 Olfr960Q8VET5 316 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 119 ms