RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PRR9Q5T870 116 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 STX12Q86Y82 276 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 TMEM252Q8N6L7 170 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 VSIG2Q96IQ7 327 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 UPK3BQ9BT76 320 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 A0A096LPF7 62 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 ZNF253O75346 499 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 IGHV3-53P01767 116 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
PHGDH-213ENST00000641272 DAZ2Q13117 558 aaKnown RBP11.52□□□□□ -0.57
PHGDH-213ENST00000641272 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 MRPL53Q96EL3 112 aaKnown RBP11.52□□□□□ -0.57
PHGDH-213ENST00000641272 FUT9Q9Y231 359 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 TIMM9Q9Y5J7 89 aa11.52□□□□□ -0.57
PHGDH-213ENST00000641272 H2AFB2P0C5Z0 115 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
PHGDH-213ENST00000641272 LINC00315P59091 139 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 HBG1P69891 147 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 HBG2P69892 147 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 Q6ZQT7 251 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
PHGDH-213ENST00000641272 THAP6Q8TBB0 222 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
PHGDH-213ENST00000641272 MRPL16Q9NX20 251 aaKnown RBP11.51□□□□□ -0.57
PHGDH-213ENST00000641272 KLLNB2CW77 178 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
PHGDH-213ENST00000641272 S100A11P31949 105 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 ICAM4Q14773 271 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 Q8TAT8 98 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 SLC25A2Q9BXI2 301 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 TP53TG3Q9ULZ0 132 aa11.5□□□□□ -0.57
PHGDH-213ENST00000641272 H3BNG1 76 aa11.49□□□□□ -0.57
PHGDH-213ENST00000641272 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHGDH-213ENST00000641272 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
PHGDH-213ENST00000641272 FAM19A4Q96LR4 140 aa11.49□□□□□ -0.57
PHGDH-213ENST00000641272 VGLL1Q99990 258 aa11.49□□□□□ -0.57
PHGDH-213ENST00000641272 A0A1W2PPQ1 181 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 RGS13O14921 159 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 ZNF324O75467 553 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-213ENST00000641272 GPX1P07203 203 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 TCL1AP56279 114 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 IL15RAQ13261 267 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 PDE6HQ13956 83 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 ZFAND2AQ8N6M9 145 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 AAMDCQ9H7C9 122 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
PHGDH-213ENST00000641272 SPINK4O60575 86 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 MPDU1O75352 247 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 SIX6O95475 246 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 OR10J4P0C629 311 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 ANXA2RQ3ZCQ2 193 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 Q8N1X5 172 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 PHYHIPLQ96FC7 376 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 ICOSQ9Y6W8 199 aa11.47□□□□□ -0.57
PHGDH-213ENST00000641272 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 PAX4O43316 350 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 NXPH4O95158 308 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 CRISP2P16562 243 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 NHLH2Q02577 135 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 ATP6V1FQ16864 119 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 LRRC37A5PQ49AS3 106 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 OR5C1Q8NGR4 320 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 SCRT2Q9NQ03 307 aa11.46□□□□□ -0.57
PHGDH-213ENST00000641272 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 SIVA1O15304 175 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
PHGDH-213ENST00000641272 MUC21Q5SSG8 566 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 CHAC2Q8WUX2 184 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 ST6GAL2Q96JF0 529 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 C8orf49Q96NF6 230 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 CCDC32Q9BV29 185 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 OR5AC2Q9NZP5 309 aa11.45□□□□□ -0.58
PHGDH-213ENST00000641272 IBA57Q5T440 356 aaKnown RBP11.44□□□□□ -0.58
PHGDH-213ENST00000641272 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-213ENST00000641272 C18orf15Q96N68 181 aa11.44□□□□□ -0.58
PHGDH-213ENST00000641272 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
PHGDH-213ENST00000641272 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
PHGDH-213ENST00000641272 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
PHGDH-213ENST00000641272 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
PHGDH-213ENST00000641272 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
PHGDH-213ENST00000641272 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
PHGDH-213ENST00000641272 OR7C2O60412 319 aa11.42□□□□□ -0.58
PHGDH-213ENST00000641272 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
PHGDH-213ENST00000641272 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
PHGDH-213ENST00000641272 SFTA3P0C7M3 94 aa11.42□□□□□ -0.58
PHGDH-213ENST00000641272 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
PHGDH-213ENST00000641272 ZNF138P52744 262 aa11.42□□□□□ -0.58
PHGDH-213ENST00000641272 CRYBA4P53673 196 aa11.41□□□□□ -0.58
PHGDH-213ENST00000641272 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms