RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FCN3O75636 299 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 IGHV1-46P01743 117 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 IGHG3P01860 377 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 LYNX1P0DP58 116 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 GLRXP35754 106 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 EFNA4P52798 201 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 CT83Q5H943 113 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 SEM1Q6ZVN7 128 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 GFRA4Q9GZZ7 299 aa10.83□□□□□ -0.68
SCARB2-227ENST00000640957 SH2D1AO60880 128 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 COX7A1P24310 79 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 TMEM158Q8WZ71 300 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 MRPL35Q9NZE8 188 aaKnown RBP10.82□□□□□ -0.68
SCARB2-227ENST00000640957 RPL27AP46776 148 aaKnown RBP10.82□□□□□ -0.68
SCARB2-227ENST00000640957 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 CELSR1Q9NYQ6 3014 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
SCARB2-227ENST00000640957 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-227ENST00000640957 ZNF80P51504 273 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-227ENST00000640957 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-227ENST00000640957 CNIH1O95406 144 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-227ENST00000640957 HHLA3Q9XRX5 114 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 NDUFS8O00217 210 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 Q6ZQT7 251 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 TMEM167AQ8TBQ9 72 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 CENPEQ02224 2701 aa10.81□□□□□ -0.68
SCARB2-227ENST00000640957 ZFHX3Q15911 3703 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 H3BVH4 76 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 APOMO95445 188 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 LHBP01229 141 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 CD40P25942 277 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 CEND1Q8N111 149 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 NGBQ9NPG2 151 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 EMP1P54849 157 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 ODF1Q14990 250 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 UFC1Q9Y3C8 167 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 FAM208BQ5VWN6 2430 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 IGKCP01834 107 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 ERCC8Q13216 396 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 GFRALQ6UXV0 394 aa10.8□□□□□ -0.68
SCARB2-227ENST00000640957 PHLDA1Q8WV24 401 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-227ENST00000640957 IGHV3-49A0A0A0MS15 119 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 ZNF833PQ6ZTB9 187 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 FAM215AQ9Y5M1 114 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 J3QR89 54 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 PSMB2P49721 201 aa10.79□□□□□ -0.68
SCARB2-227ENST00000640957 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
SCARB2-227ENST00000640957 ZFP2Q6ZN57 461 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 TM4SF5O14894 197 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 NDUFB3O43676 98 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 IGKV1-17P01599 117 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 BSPH1Q075Z2 132 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 RAB9BQ9NP90 201 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 ZFYVE26Q68DK2 2539 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 IGLV1-44P01699 117 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 SIGLEC15Q6ZMC9 328 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 RNF183Q96D59 192 aa10.78□□□□□ -0.68
SCARB2-227ENST00000640957 LY6HO94772 140 aa10.77□□□□□ -0.68
SCARB2-227ENST00000640957 FHL3Q13643 280 aa10.77□□□□□ -0.68
SCARB2-227ENST00000640957 PRSS33Q8NF86 280 aa10.77□□□□□ -0.68
SCARB2-227ENST00000640957 FAM90A27PA6NNH2 459 aa10.77□□□□□ -0.69
SCARB2-227ENST00000640957 MRGPRG-AS1Q2M3A8 158 aa10.77□□□□□ -0.69
SCARB2-227ENST00000640957 TRGV9Q99603 122 aa10.77□□□□□ -0.69
SCARB2-227ENST00000640957 KIR2DL4Q99706 377 aa10.77□□□□□ -0.69
SCARB2-227ENST00000640957 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
SCARB2-227ENST00000640957 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 TRGV3P03979 118 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 HLA-DRB4P13762 266 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 NFE4Q86UQ8 179 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 MAP1LC3AQ9H492 121 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 MRPL16Q9NX20 251 aaKnown RBP10.76□□□□□ -0.69
SCARB2-227ENST00000640957 HLA-DRB4X5D2U9 266 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 E9PLD3 99 aa10.76□□□□□ -0.69
SCARB2-227ENST00000640957 RNF182Q8N6D2 247 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 ACACBO00763 2458 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 H7C2G1 150 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 CSPG4Q6UVK1 2322 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 MC5RP33032 325 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 XGP55808 180 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 HES1Q14469 280 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 SCNM1Q9BWG6 230 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 LINC00312Q9Y6C7 94 aa10.75□□□□□ -0.69
SCARB2-227ENST00000640957 F8W1H4 67 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 DPM2O94777 84 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 TTC9CQ8N5M4 171 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 C1orf122Q6ZSJ8 110 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms