RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZFP36P26651 326 aaKnown RBP11.37□□□□□ -0.59
SCARB2-221ENST00000640341 S100A7P31151 101 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 EPG5Q9HCE0 2579 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 IGHV2-70DA0A0C4DH43 119 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 K7ENP7 123 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 PRTN3P24158 256 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 PSG9Q00887 426 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 C7orf71A4D174 169 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 HIST1H1AQ02539 215 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-221ENST00000640341 OR11H6Q8NGC7 330 aa11.37□□□□□ -0.59
SCARB2-221ENST00000640341 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 SPRY2O43597 315 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 Q6AWC8 147 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 AP1S3Q96PC3 154 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 UFC1Q9Y3C8 167 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 NDUFA3O95167 84 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 PRSS1P07477 247 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 SAPCD1Q5SSQ6 148 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 C16orf54Q6UWD8 224 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 SMAD5-AS1Q9Y6J3 95 aa11.36□□□□□ -0.59
SCARB2-221ENST00000640341 IGKV3-7A0A075B6H7 116 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 COX8AP10176 69 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 IL17RELQ6ZVW7 336 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 DEFB125Q8N687 156 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 IFI27L1Q96BM0 104 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 HBDP02042 147 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 NPBQ8NG41 125 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 IGHV7-81A0A0B4J1V7 117 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 PAX2Q02962 417 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 PDE6HQ13956 83 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
SCARB2-221ENST00000640341 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 Q6ZQT7 251 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
SCARB2-221ENST00000640341 BMI1P35226 326 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 C2orf91Q6ZV80 131 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 UBTD1Q9HAC8 227 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 RAXQ9Y2V3 346 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 A0A1B0GW15 77 aa11.34□□□□□ -0.59
SCARB2-221ENST00000640341 CSPG4Q6UVK1 2322 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 LEPP41159 167 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 CENPEQ02224 2701 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
SCARB2-221ENST00000640341 H3BUT2 72 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 RBX1P62877 108 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 K7EMI3 77 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 ADORA2A-AS1P86434 159 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
SCARB2-221ENST00000640341 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 ODF3BA8MYP8 253 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 K7EP13 123 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 IGHG4P01861 327 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 M0R1W7 72 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
SCARB2-221ENST00000640341 Q8N9W7 124 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
SCARB2-221ENST00000640341 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 A1L4Q6 167 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 CD5LO43866 347 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 SAA4P35542 130 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 DEFB1P60022 68 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 KLK15Q9H2R5 256 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 TRGV3P03979 118 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
SCARB2-221ENST00000640341 GCSHP23434 173 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 PEF1Q9UBV8 284 aaKnown RBP11.29□□□□□ -0.6
SCARB2-221ENST00000640341 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 GOSR1O95249 250 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 FOXC2Q99958 501 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
SCARB2-221ENST00000640341 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 DTX2Q86UW9 622 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
SCARB2-221ENST00000640341 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
SCARB2-221ENST00000640341 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms