RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 TMEM50AO95807 157 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 HNRNPA3P51991 378 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 KRTAP10-2P60368 255 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SPCS3P61009 180 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SPHARQ15513 63 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 OR5H6Q8NGV6 325 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 ORAI1Q96D31 301 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 MCUBQ9NWR8 336 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 MRPL16Q9NX20 251 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 EXTL2Q9UBQ6 330 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 STRAPQ9Y3F4 350 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SMG1Q96Q15 3661 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 IGKV2D-26A0A0A0MRZ7 120 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 A0A1W2PP11 408 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 PRR32B1ATL7 298 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 PLA2G10O15496 165 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SOCS1O15524 211 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 HIST1H1DP16402 221 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 PRSS3P35030 304 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 UBE2D3P61077 147 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 C22orf42Q6IC83 251 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 IL34Q6ZMJ4 242 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 C15orf54Q8N8G6 183 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 RITA1Q96K30 269 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SCP2D1Q9UJQ7 156 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 APOMO95445 188 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SLC25A5P05141 298 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SULT1A3P0DMM9 295 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SULT1A4P0DMN0 295 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 CRYGAP11844 174 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 RAB3BP20337 219 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 RPS19P39019 145 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 ZNF134P52741 427 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 AP3S2P59780 193 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 RPL30P62888 115 aaKnown RBP3.04□□□□□ -1.92
GABRA1-220ENST00000638159 IGSF11Q5DX21 431 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 Q6ZRP5 223 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SCXQ7RTU7 201 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 SMIM19Q96E16 107 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 ARV1Q9H2C2 271 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 DMRT1Q9Y5R6 373 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 X6R8D5 127 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 ASPMQ8IZT6 3477 aa3.04□□□□□ -1.92
GABRA1-220ENST00000638159 TEX50A0A1B0GTY4 177 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SSNA1O43805 119 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 PPYP01298 95 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 ZNF735P0CB33 412 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 WNT4P56705 351 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 TIRAPP58753 221 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 TAS2R45P59539 299 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 YPEL3P61236 119 aaPredicted RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 RRAS2P62070 204 aaPredicted RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 GAGE2BQ13066 116 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 FCN2Q15485 313 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SMUG1Q53HV7 270 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 GLYATL2Q8WU03 294 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 U3KQ87 197 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 TRBV9A0A0B4J1U6 114 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 GHRHP01286 108 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 GPX4P36969 197 aaPredicted RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 ETV1P50549 477 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 MUC21Q5SSG8 566 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 RNASEKQ6P5S7 137 aaKnown RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 PUSL1Q8N0Z8 303 aaKnown RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 NUDT10Q8NFP7 164 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 OR5AP2Q8NGF4 316 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 NUDT11Q96G61 164 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 TXNL4BQ9NX01 149 aaKnown RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 A0A0B4J2A0 478 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 IGKV1-9A0A0C4DH69 117 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SMLR1H3BR10 107 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SSX5O60225 188 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 RPL19P84098 196 aaKnown RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 LHFPL1Q86WI0 220 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 Q8N814 137 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 RNF185Q96GF1 192 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 LINC00477Q96M19 166 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SLC25A21Q9BQT8 299 aaPredicted RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 C20orf85Q9H1P6 137 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 MED28Q9H204 178 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 LYRM2Q9NU23 88 aaPredicted RBP3.03□□□□□ -1.92
GABRA1-220ENST00000638159 SHPKQ9UHJ6 478 aa3.03□□□□□ -1.92
GABRA1-220ENST00000638159 IGHV1OR15-1A0A075B7D0 117 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 A0A1B0GVY2 172 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 C7orf71A4D174 169 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 INMT-MINDY4F8WBC2 141 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 SCGB1C1Q8TD33 95 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 HDHD3Q9BSH5 251 aaPredicted RBP3.03□□□□□ -1.93
GABRA1-220ENST00000638159 PARD6GQ9BYG4 376 aaPredicted RBP3.03□□□□□ -1.93
GABRA1-220ENST00000638159 TNFRSF18Q9Y5U5 241 aa3.03□□□□□ -1.93
GABRA1-220ENST00000638159 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
GABRA1-220ENST00000638159 BORCS7-ASMTA0A0B4J1R7 106 aa3.02□□□□□ -1.93
GABRA1-220ENST00000638159 LYRM1O43325 122 aa3.02□□□□□ -1.93
GABRA1-220ENST00000638159 TPT1P13693 172 aaKnown RBP3.02□□□□□ -1.93
GABRA1-220ENST00000638159 FUSP35637 526 aaKnown RBP eCLIP3.02□□□□□ -1.93
GABRA1-220ENST00000638159 TCL1AP56279 114 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms