RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
CTSD-209ENST00000637158 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
CTSD-209ENST00000637158 TRBV19A0A075B6N1 114 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 TRAV5A0A0B4J249 113 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 GPX1P07203 203 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
CTSD-209ENST00000637158 TCL1AP56279 114 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 TIMM9Q9Y5J7 89 aa12.47□□□□□ -0.41
CTSD-209ENST00000637158 CCDC160A6NGH7 325 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.41
CTSD-209ENST00000637158 CAV2P51636 162 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 MRPL23Q16540 153 aaKnown RBP12.46□□□□□ -0.41
CTSD-209ENST00000637158 BAK1Q16611 211 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 FRZBQ92765 325 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
CTSD-209ENST00000637158 M0R3E3 92 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 HIST1H1EP10412 219 aaKnown RBP12.45□□□□□ -0.42
CTSD-209ENST00000637158 CRISP2P16562 243 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 PVALBP20472 110 aaPredicted RBP12.45□□□□□ -0.42
CTSD-209ENST00000637158 XGP55808 180 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 ERCC8Q13216 396 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
CTSD-209ENST00000637158 RGS13O14921 159 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 CST7O76096 145 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 S100A11P31949 105 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 CD300CQ08708 224 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 BTN1A1Q13410 526 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 VWC2Q2TAL6 325 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 CHAC2Q8WUX2 184 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 VGLL1Q99990 258 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 VPS13BQ7Z7G8 4022 aa12.44□□□□□ -0.42
CTSD-209ENST00000637158 CRYBA4P53673 196 aa12.43□□□□□ -0.42
CTSD-209ENST00000637158 HBG1P69891 147 aa12.43□□□□□ -0.42
CTSD-209ENST00000637158 HBG2P69892 147 aa12.43□□□□□ -0.42
CTSD-209ENST00000637158 NEGR1Q7Z3B1 354 aa12.43□□□□□ -0.42
CTSD-209ENST00000637158 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
CTSD-209ENST00000637158 MYCBP2O75592 4640 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 A0A087WTM6 91 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 NDUFB4O95168 129 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 SULT1A1P50225 295 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 BAXQ07812 192 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 Q5VSD8 79 aa12.42□□□□□ -0.42
CTSD-209ENST00000637158 FAM25EA8MYX2 175 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 EVI2AP22794 236 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 BTCP35070 178 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 STX12Q86Y82 276 aa12.41□□□□□ -0.42
CTSD-209ENST00000637158 MRPL32Q9BYC8 188 aaKnown RBP12.41□□□□□ -0.42
CTSD-209ENST00000637158 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 UBE2L5PA0A1B0GUS4 154 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 C5orf51A6NDU8 294 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 FAM24AA6NFZ4 105 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 PRAF2O60831 178 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 ZNF415Q09FC8 603 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 FHL2Q14192 279 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 EXOC3-AS1Q8N2X6 119 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 BLNKQ8WV28 456 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
CTSD-209ENST00000637158 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
CTSD-209ENST00000637158 TNFRSF18Q9Y5U5 241 aa12.4□□□□□ -0.42
CTSD-209ENST00000637158 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 CCSO14618 274 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 SRIP30626 198 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 ICAM4Q14773 271 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 IQCF2Q8IXL9 164 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 PCNPQ8WW12 178 aaKnown RBP12.39□□□□□ -0.43
CTSD-209ENST00000637158 C2orf50Q96LR7 162 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
CTSD-209ENST00000637158 MSRB1Q9NZV6 116 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 ZNF492Q9P255 531 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 TP53TG3Q9ULZ0 132 aa12.39□□□□□ -0.43
CTSD-209ENST00000637158 ORM1P02763 201 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 PYYP10082 97 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 FGF7P21781 194 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 GCSHP23434 173 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTSD-209ENST00000637158 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 C11orf1Q9H5F2 150 aa12.38□□□□□ -0.43
CTSD-209ENST00000637158 SRRM2Q9UQ35 2752 aaKnown RBP12.38□□□□□ -0.43
CTSD-209ENST00000637158 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
CTSD-209ENST00000637158 K7EQD1 137 aa12.37□□□□□ -0.43
CTSD-209ENST00000637158 DNAH10OSP0CZ25 163 aa12.37□□□□□ -0.43
CTSD-209ENST00000637158 ZNF138P52744 262 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms