RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-215	ENST00000628267	BTN1A1	Q13410	526 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	ICAM4	Q14773	271 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	MIC13	Q5XKP0	118 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	HHLA3	Q9XRX5	114 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	PRELID1	Q9Y255	219 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	LY96	Q9Y6Y9	160 aa		13.66	□□□□□ -0.22
UBE3A-215	ENST00000628267	TRBV19	A0A075B6N1	114 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267		M0R3E3	92 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	MBP	P02686	304 aa	Predicted RBP	13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	GPX1	P07203	203 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	RNASE4	P34096	147 aa	Known RBP	13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	INPP1	P49441	399 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	CRYBA4	P53673	196 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	NEGR1	Q7Z3B1	354 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	VGLL1	Q99990	258 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267	AGPAT4-IT1	Q9H0P7	198 aa		13.65	□□□□□ -0.22
UBE3A-215	ENST00000628267		L7N2F9	121 aa		13.64	□□□□□ -0.23
UBE3A-215	ENST00000628267	IGHV3-53	P01767	116 aa		13.64	□□□□□ -0.23
UBE3A-215	ENST00000628267	NMB	P08949	121 aa		13.64	□□□□□ -0.23
UBE3A-215	ENST00000628267	CRISP2	P16562	243 aa		13.64	□□□□□ -0.23
UBE3A-215	ENST00000628267	VAMP2	P63027	116 aa		13.64	□□□□□ -0.23
UBE3A-215	ENST00000628267	RGS13	O14921	159 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	PRAF2	O60831	178 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	GCSH	P23434	173 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	RPL29	P47914	159 aa	Known RBP	13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	PDE6H	Q13956	83 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	MITD1	Q8WV92	249 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	MSRB1	Q9NZV6	116 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	TMEM14C	Q9P0S9	112 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	TIMM9	Q9Y5J7	89 aa		13.63	□□□□□ -0.23
UBE3A-215	ENST00000628267	FAM229A	H3BQW9	127 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	SMR3B	P02814	79 aa	Predicted RBP	13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	HIST1H1E	P10412	219 aa	Known RBP	13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	EVI2A	P22794	236 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	FHL2	Q14192	279 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	SPANXN2	Q5MJ10	180 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	C9orf47	Q6ZRZ4	202 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	C8orf49	Q96NF6	230 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	MRPL32	Q9BYC8	188 aa	Known RBP	13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	SRR	Q9GZT4	340 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	C20orf85	Q9H1P6	137 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	SLC39A9	Q9NUM3	307 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	UQCC1	Q9NVA1	299 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	MRPL16	Q9NX20	251 aa	Known RBP	13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	WDR83OS	Q9Y284	106 aa		13.62	□□□□□ -0.23
UBE3A-215	ENST00000628267	IGHV1OR15-1	A0A075B7D0	117 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	NDUFB4	O95168	129 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	BCAP31	P51572	246 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	ARPC5L	Q9BPX5	153 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	AAMDC	Q9H7C9	122 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	TP53TG3	Q9ULZ0	132 aa		13.61	□□□□□ -0.23
UBE3A-215	ENST00000628267	CST7	O76096	145 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	CAV2	P51636	162 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	ZNF846	Q147U1	533 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	TMEM78	Q5T7P6	136 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	TRIQK	Q629K1	86 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	ZFAND2A	Q8N6M9	145 aa		13.6	□□□□□ -0.23
UBE3A-215	ENST00000628267	CENPX	A8MT69	81 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	SRI	P30626	198 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	BAK1	Q16611	211 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	VWC2	Q2TAL6	325 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	CNPY1	Q3B7I2	92 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	IQCF2	Q8IXL9	164 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	EXOC3-AS1	Q8N2X6	119 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	CHAC2	Q8WUX2	184 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	MDFIC	Q9P1T7	246 aa		13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	LSM5	Q9Y4Y9	91 aa	Known RBP	13.59	□□□□□ -0.23
UBE3A-215	ENST00000628267	TRGV4	A0A0C4DH28	118 aa		13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267		E5RGE8	158 aa		13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267	ZNF415	Q09FC8	603 aa		13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267	WFDC10B	Q8IUB3	73 aa		13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267	BLNK	Q8WV28	456 aa		13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267	SRRM2	Q9UQ35	2752 aa	Known RBP	13.58	□□□□□ -0.24
UBE3A-215	ENST00000628267	FAT1	Q14517	4588 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267		K7EQD1	137 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	PYY	P10082	97 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	S100A11	P31949	105 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	BAX	Q07812	192 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	PRR9	Q5T870	116 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	C10orf126	Q8N4M7	172 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	PCNP	Q8WW12	178 aa	Known RBP	13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	ZNF492	Q9P255	531 aa		13.57	□□□□□ -0.24
UBE3A-215	ENST00000628267	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	FAM24A	A6NFZ4	105 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	CCS	O14618	274 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	IGKV2D-40	P01614	121 aa	Predicted RBP	13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	ORM1	P02763	201 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	PVALB	P20472	110 aa	Predicted RBP	13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	BTC	P35070	178 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267		Q6ZQT7	251 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267		Q6ZSN1	163 aa		13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	FLG2	Q5D862	2391 aa	Predicted RBP	13.56	□□□□□ -0.24
UBE3A-215	ENST00000628267	TRBV7-9	A0A0J9YWB2	115 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	UBE2L5P	A0A1B0GUS4	154 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	SULT1A1	P50225	295 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	FAM122C	Q6P4D5	195 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	TMEM70	Q9BUB7	260 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	C11orf1	Q9H5F2	150 aa		13.55	□□□□□ -0.24
UBE3A-215	ENST00000628267	CCDC160	A6NGH7	325 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms