RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZNF767PQ75MW2 155 aa11.96□□□□□ -0.49
UBE3D-208ENST00000626828 RAB24Q969Q5 203 aa11.96□□□□□ -0.49
UBE3D-208ENST00000626828 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
UBE3D-208ENST00000626828 RBAKDNA6NC62 111 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 PGPA6NDG6 321 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 SMLR1H3BR10 107 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 J3KRW8 73 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 HMGB3O15347 200 aaKnown RBP11.95□□□□□ -0.5
UBE3D-208ENST00000626828 STAG3L2P0CL84 134 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 CCDC28AQ8IWP9 274 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 ARL6IP6Q8N6S5 226 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 VGLL1Q99990 258 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 OTORQ9NRC9 128 aa11.95□□□□□ -0.5
UBE3D-208ENST00000626828 PLECQ15149 4684 aaKnown RBP11.94□□□□□ -0.5
UBE3D-208ENST00000626828 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
UBE3D-208ENST00000626828 TRAV12-3A0A0B4J271 114 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 LYRM9A8MSI8 78 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 HMSDA8MTL9 139 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
UBE3D-208ENST00000626828 GPX1P07203 203 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 CRISP2P16562 243 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 ZNF138P52744 262 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 CMTM2Q8TAZ6 248 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 ZNF492Q9P255 531 aa11.94□□□□□ -0.5
UBE3D-208ENST00000626828 LYSTQ99698 3801 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 TRBV7-9A0A0J9YWB2 115 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 C7orf71A4D174 169 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 KLLNB2CW77 178 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 LY6G6CO95867 125 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 DAD1P61803 113 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 CYTL1Q9NRR1 136 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 APLNQ9ULZ1 77 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 TIMM8BQ9Y5J9 83 aaPredicted RBP11.93□□□□□ -0.5
UBE3D-208ENST00000626828 RYR3Q15413 4870 aa11.93□□□□□ -0.5
UBE3D-208ENST00000626828 A0A0D9SG52 128 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 CXorf1O96002 111 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 RNASE4P34096 147 aaKnown RBP11.92□□□□□ -0.5
UBE3D-208ENST00000626828 ZNF345Q14585 488 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 SUN5Q8TC36 379 aa11.92□□□□□ -0.5
UBE3D-208ENST00000626828 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
UBE3D-208ENST00000626828 PLAC8L1A1L4L8 177 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 ZNF324O75467 553 aaPredicted RBP11.91□□□□□ -0.5
UBE3D-208ENST00000626828 GCHFRP30047 84 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 AKR1C8PQ5T2L2 129 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 FAM210BQ96KR6 192 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 ARPC5LQ9BPX5 153 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 SACSQ9NZJ4 4579 aa11.91□□□□□ -0.5
UBE3D-208ENST00000626828 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
UBE3D-208ENST00000626828 CD300CQ08708 224 aa11.9□□□□□ -0.5
UBE3D-208ENST00000626828 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
UBE3D-208ENST00000626828 RNASE8Q8TDE3 154 aaKnown RBP11.9□□□□□ -0.5
UBE3D-208ENST00000626828 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
UBE3D-208ENST00000626828 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.5
UBE3D-208ENST00000626828 CTXND1A0A1B0GTU2 59 aa11.89□□□□□ -0.51
UBE3D-208ENST00000626828 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
UBE3D-208ENST00000626828 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
UBE3D-208ENST00000626828 Q6ZNX1 250 aa11.89□□□□□ -0.51
UBE3D-208ENST00000626828 LINC00467Q9BRT7 94 aa11.89□□□□□ -0.51
UBE3D-208ENST00000626828 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
UBE3D-208ENST00000626828 CBY3A6NI87 242 aa11.88□□□□□ -0.51
UBE3D-208ENST00000626828 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
UBE3D-208ENST00000626828 EIF4E3Q8N5X7 224 aaKnown RBP11.88□□□□□ -0.51
UBE3D-208ENST00000626828 NDUFAF3Q9BU61 184 aa11.88□□□□□ -0.51
UBE3D-208ENST00000626828 RYR2Q92736 4967 aa11.88□□□□□ -0.51
UBE3D-208ENST00000626828 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 HTN3P15516 51 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 SUMO1P63165 101 aaKnown RBP11.87□□□□□ -0.51
UBE3D-208ENST00000626828 EIF5AP63241 154 aaKnown RBP11.87□□□□□ -0.51
UBE3D-208ENST00000626828 ANXA2RQ3ZCQ2 193 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 Q8TAT8 98 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
UBE3D-208ENST00000626828 KANTRA0A1W2PQU2 76 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 A0A1W2PRE2 83 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 RGS13O14921 159 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 SEC11BP0C7V7 166 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 ZNF726P1Q15940 193 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 C5orf17Q8NAS9 161 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 ZNF680Q8NEM1 530 aa11.86□□□□□ -0.51
UBE3D-208ENST00000626828 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
UBE3D-208ENST00000626828 K7EQM0 130 aa11.85□□□□□ -0.51
UBE3D-208ENST00000626828 ATP5G1P05496 136 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms