RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 FAM223BA6NKX1 122 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 HLA-DMBP28068 263 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 RPL11P62913 178 aaKnown RBP7.69□□□□□ -1.18
VTA1-205ENST00000620996 FOXL1Q12952 345 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 SIGLEC15Q6ZMC9 328 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 FAM223AQ8IWN6 122 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 A0A1B0GV72 72 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 APOHP02749 345 aaPredicted RBP7.69□□□□□ -1.18
VTA1-205ENST00000620996 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
VTA1-205ENST00000620996 PYGO2Q9BRQ0 406 aa7.69□□□□□ -1.18
VTA1-205ENST00000620996 HELZ2Q9BYK8 2649 aaKnown RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 IGKV2-40A0A087WW87 121 aaPredicted RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 HOXA3O43365 443 aaPredicted RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 IGKV2D-40P01614 121 aaPredicted RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 FRMD6-AS1P0C7T7 363 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 PRR31Q5SQ13 230 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 Q71RC1 249 aaPredicted RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 Q86TA4 180 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 LRRC75A-AS1Q8N1F1 130 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 OR4X2Q8NGF9 303 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 NBPF19A0A087WUL8 3843 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 FBLL1A6NHQ2 334 aaKnown RBP7.68□□□□□ -1.18
VTA1-205ENST00000620996 SNURFLB1AK76 121 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 P01737 135 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 IGF1P05019 195 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 IGLC3P0DOY3 106 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 AZU1P20160 251 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 NTF3P20783 257 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 TSPOP30536 169 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 ACTL10Q5JWF8 245 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 PRSS57Q6UWY2 283 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 ZFAND3Q9H8U3 227 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 NRN1Q9NPD7 142 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 TEX15Q9BXT5 2789 aa7.68□□□□□ -1.18
VTA1-205ENST00000620996 C10orf99Q6UWK7 81 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 SIGLECL1Q8N7X8 197 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 SONP18583 2426 aaKnown RBP7.67□□□□□ -1.18
VTA1-205ENST00000620996 PSG9Q00887 426 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 MPV17L2Q567V2 206 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 RNF182Q8N6D2 247 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 MRPS12O15235 138 aaKnown RBP7.67□□□□□ -1.18
VTA1-205ENST00000620996 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 NAT8BQ9UHF3 227 aa7.67□□□□□ -1.18
VTA1-205ENST00000620996 LTAP01374 205 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 CAMPP49913 170 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
VTA1-205ENST00000620996 LINC00322Q6ZN03 302 aaPredicted RBP7.66□□□□□ -1.18
VTA1-205ENST00000620996 TCF24Q7RTU0 167 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 Q8TAT8 98 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
VTA1-205ENST00000620996 VPREB3Q9UKI3 123 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 SMAD5-AS1Q9Y6J3 95 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
VTA1-205ENST00000620996 AMTP48728 403 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 CKS1BP61024 79 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 UNQ9165/PRO28630Q6UXU0 137 aa7.66□□□□□ -1.18
VTA1-205ENST00000620996 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
VTA1-205ENST00000620996 TMSB15BA0A087X1C1 80 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 BUB3O43684 328 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 TYMSP04818 313 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 CT45A10P0DMU9 189 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 FAM19A2Q8N3H0 131 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 GRAMD2BQ96HH9 432 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 PSMG3-AS1Q96PY0 264 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
VTA1-205ENST00000620996 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 A0A0G2JLM5 398 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 CHEK1O14757 476 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 NUDT3O95989 172 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 PDE6HQ13956 83 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 PSG3Q16557 428 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 C19orf54Q5BKX5 351 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 USMG5Q96IX5 58 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 C8orf49Q96NF6 230 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 SS18L2Q9UHA2 77 aa7.65□□□□□ -1.18
VTA1-205ENST00000620996 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.19
VTA1-205ENST00000620996 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 HIGD1CA8MV81 97 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 CRISP2P16562 243 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 KHDC1LQ5JSQ8 128 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 FER1L6-AS1Q8NA97 138 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 PGLYRP4Q96LB8 373 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 PRSS22Q9GZN4 317 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 CR1P17927 2039 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 ITPR3Q14573 2671 aa7.65□□□□□ -1.19
VTA1-205ENST00000620996 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 ATP6V0BQ99437 205 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 MUC21A0A0G2JKD1 596 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 MUC21A0A140T8X8 626 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 CRIP2P52943 208 aaPredicted RBP7.64□□□□□ -1.19
VTA1-205ENST00000620996 ERCC8Q13216 396 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 Q6YL49 198 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
VTA1-205ENST00000620996 C16orf92Q96LL3 132 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 368.7 ms