RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ATP5SQ99766 215 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 SMIM3Q9BZL3 60 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 OR51M1Q9H341 326 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 HSPB11Q9Y547 144 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 C7orf71A4D174 169 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 PRSS29PA6NIE9 313 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 GAGE7O76087 117 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 NBEAP1P0C6P0 100 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 RNF141Q8WVD5 230 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 PHYHIPLQ96FC7 376 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 LINC00477Q96M19 166 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 VGLL1Q99990 258 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 PYGO2Q9BRQ0 406 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 ATG101Q9BSB4 218 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 PAXXQ9BUH6 204 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 MRPL32Q9BYC8 188 aaKnown RBP12.01□□□□□ -0.49
HMGN3-203ENST00000620514 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 KCNIP2Q9NS61 270 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 KIAA1109Q2LD37 5005 aa12.01□□□□□ -0.49
HMGN3-203ENST00000620514 SNURFLB1AK76 121 aa12□□□□□ -0.49
HMGN3-203ENST00000620514 KLLNB2CW77 178 aa12□□□□□ -0.49
HMGN3-203ENST00000620514 C17orf112F2Z3M2 114 aa12□□□□□ -0.49
HMGN3-203ENST00000620514 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
HMGN3-203ENST00000620514 ZNF503Q96F45 646 aa12□□□□□ -0.49
HMGN3-203ENST00000620514 MBD2Q9UBB5 411 aa12□□□□□ -0.49
HMGN3-203ENST00000620514 ZNF324O75467 553 aaPredicted RBP11.99□□□□□ -0.49
HMGN3-203ENST00000620514 RPL12P30050 165 aaKnown RBP11.99□□□□□ -0.49
HMGN3-203ENST00000620514 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
HMGN3-203ENST00000620514 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
HMGN3-203ENST00000620514 PRR9Q5T870 116 aa11.99□□□□□ -0.49
HMGN3-203ENST00000620514 C9orf47Q6ZRZ4 202 aa11.99□□□□□ -0.49
HMGN3-203ENST00000620514 OR7C2O60412 319 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 EIF3GO75821 320 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGN3-203ENST00000620514 PET100P0DJ07 73 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 CRISP2P16562 243 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 HOXA5P20719 270 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-203ENST00000620514 OR5I1Q13606 314 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 Q6ZQT7 251 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 Q6ZTI0 123 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
HMGN3-203ENST00000620514 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 A0A0J9YY99 117 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
HMGN3-203ENST00000620514 TMEM78Q5T7P6 136 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 SCGB1C1Q8TD33 95 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 BATF3Q9NR55 127 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 LINC00588Q9Y4M8 146 aa11.97□□□□□ -0.49
HMGN3-203ENST00000620514 DYNC1H1Q14204 4646 aaKnown RBP11.96□□□□□ -0.49
HMGN3-203ENST00000620514 IFNA5P01569 189 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 GPX1P07203 203 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 RANP62826 216 aaKnown RBP11.96□□□□□ -0.49
HMGN3-203ENST00000620514 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.49
HMGN3-203ENST00000620514 Q8TAT8 98 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 GNPNAT1Q96EK6 184 aaPredicted RBP11.96□□□□□ -0.49
HMGN3-203ENST00000620514 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 TMPRSS5Q9H3S3 457 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 ALG5Q9Y673 324 aa11.96□□□□□ -0.49
HMGN3-203ENST00000620514 M6PRP20645 277 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 UBE2L3P68036 154 aaKnown RBP11.95□□□□□ -0.5
HMGN3-203ENST00000620514 ANXA2RQ3ZCQ2 193 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 Q9H3A6 140 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 KLF12Q9Y4X4 402 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 DNAH11Q96DT5 4516 aa11.95□□□□□ -0.5
HMGN3-203ENST00000620514 PKD1P98161 4303 aa11.94□□□□□ -0.5
HMGN3-203ENST00000620514 NMBP08949 121 aa11.94□□□□□ -0.5
HMGN3-203ENST00000620514 ZNF138P52744 262 aa11.94□□□□□ -0.5
HMGN3-203ENST00000620514 CCL18P55774 89 aa11.94□□□□□ -0.5
HMGN3-203ENST00000620514 RXFP4Q8TDU9 374 aa11.94□□□□□ -0.5
HMGN3-203ENST00000620514 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 RGS13O14921 159 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
HMGN3-203ENST00000620514 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
HMGN3-203ENST00000620514 CSN1S1P47710 185 aa11.92□□□□□ -0.5
HMGN3-203ENST00000620514 TCL1AP56279 114 aa11.92□□□□□ -0.5
HMGN3-203ENST00000620514 SOHLH1Q5JUK2 328 aa11.92□□□□□ -0.5
HMGN3-203ENST00000620514 LYPD1Q8N2G4 141 aa11.92□□□□□ -0.5
HMGN3-203ENST00000620514 IGHV1OR15-1A0A075B7D0 117 aa11.91□□□□□ -0.5
HMGN3-203ENST00000620514 RBAKDNA6NC62 111 aa11.91□□□□□ -0.5
HMGN3-203ENST00000620514 SPINK4O60575 86 aa11.91□□□□□ -0.5
HMGN3-203ENST00000620514 TAS2R45P59539 299 aa11.91□□□□□ -0.5
HMGN3-203ENST00000620514 RAB2AP61019 212 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms