RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CUBNO60494 3623 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 C19orf71A6NCJ1 209 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 IGFL4Q6B9Z1 124 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 LYPD1Q8N2G4 141 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 EEF1AKMT3Q96AZ1 226 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 PRSS22Q9GZN4 317 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 KLK15Q9H2R5 256 aa13.49□□□□□ -0.25
CNOT3-209ENST00000617930 OTOGQ6ZRI0 2925 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 TRBV12-3P01733 135 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 PMCHL1Q16048 86 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 KLHDC1Q8N7A1 406 aa13.48□□□□□ -0.25
CNOT3-209ENST00000617930 TRBV7-1A0A0A6YYK4 115 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 BUB3O43684 328 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 HLA-DMBP28068 263 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 ATP5G2Q06055 141 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 ZNF124Q15973 351 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 PRR31Q5SQ13 230 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 FAM162BQ5T6X4 162 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 ATOH7Q8N100 152 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 RNF24Q9Y225 148 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 TRGV3P03979 118 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
CNOT3-209ENST00000617930 GTSF1Q8WW33 167 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 GFRA4Q9GZZ7 299 aa13.47□□□□□ -0.25
CNOT3-209ENST00000617930 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.25
CNOT3-209ENST00000617930 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.25
CNOT3-209ENST00000617930 IGLC3P0DOY3 106 aa13.46□□□□□ -0.25
CNOT3-209ENST00000617930 BTF3P20290 206 aaKnown RBP13.46□□□□□ -0.25
CNOT3-209ENST00000617930 PDE6HQ13956 83 aa13.46□□□□□ -0.25
CNOT3-209ENST00000617930 Q6ZN92 141 aa13.46□□□□□ -0.25
CNOT3-209ENST00000617930 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
CNOT3-209ENST00000617930 ZNF207O43670 478 aaKnown RBP13.46□□□□□ -0.26
CNOT3-209ENST00000617930 RPL7P18124 248 aaKnown RBP13.46□□□□□ -0.26
CNOT3-209ENST00000617930 TMEM95Q3KNT9 176 aa13.46□□□□□ -0.26
CNOT3-209ENST00000617930 LCN12Q6JVE5 192 aa13.46□□□□□ -0.26
CNOT3-209ENST00000617930 IGHV3-49A0A0A0MS15 119 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 TRBV6-1A0A0K0K1D8 114 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 CHEK1O14757 476 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 CRIP1P50238 77 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 TMEM75Q8N9X5 138 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 ZC2HC1AQ96GY0 325 aa13.45□□□□□ -0.26
CNOT3-209ENST00000617930 FAM223BA6NKX1 122 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 FOXA3P55318 350 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-209ENST00000617930 CFHR3Q02985 330 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 PSG3Q16557 428 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 COL5A1-AS1Q5SY13 56 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 C9orf139Q6ZV77 190 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 FAM223AQ8IWN6 122 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 PSG8Q9UQ74 426 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 SCGB2A1O75556 95 aa13.44□□□□□ -0.26
CNOT3-209ENST00000617930 NPIPB6E9PJ23 425 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 IGLV1-40P01703 118 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 C16orf54Q6UWD8 224 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 UNQ9165/PRO28630Q6UXU0 137 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 TMEM208Q9BTX3 173 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 U3KQE9 123 aa13.43□□□□□ -0.26
CNOT3-209ENST00000617930 IGKV2-40A0A087WW87 121 aaPredicted RBP13.42□□□□□ -0.26
CNOT3-209ENST00000617930 FAM231BA6NCW3 169 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 DLEU1O43261 78 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 BRI3O95415 125 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 IGKV2D-40P01614 121 aaPredicted RBP13.42□□□□□ -0.26
CNOT3-209ENST00000617930 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 MAJINQ3KP22 176 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 C8orf49Q96NF6 230 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 CLEC5AQ9NY25 188 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 CHCHD1Q96BP2 118 aaKnown RBP13.42□□□□□ -0.26
CNOT3-209ENST00000617930 URB1-AS1Q96HZ7 61 aa13.42□□□□□ -0.26
CNOT3-209ENST00000617930 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 C2orf70A6NJV1 201 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 K7EQM0 130 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 M0QZ24 198 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 TMEM190Q8WZ59 177 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 TMEM70Q9BUB7 260 aa13.41□□□□□ -0.26
CNOT3-209ENST00000617930 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 PSG9Q00887 426 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 SMR3AQ99954 134 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 VGLL1Q99990 258 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 AAMDCQ9H7C9 122 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
CNOT3-209ENST00000617930 C20orf202A1L168 122 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 FOSL1P15407 271 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 ARL3P36405 182 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 TFPI2P48307 235 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 Q6YL49 198 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 RNF182Q8N6D2 247 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 GOLT1BQ9Y3E0 138 aa13.4□□□□□ -0.26
CNOT3-209ENST00000617930 A0A087X0K7 114 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 IGHV1-24A0A0C4DH33 117 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms