RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SLURP1P55000 103 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 FOXL1Q12952 345 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8NFD4 153 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLC7A0M8Q6 106 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 CDX1P47902 265 aaPredicted RBP8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 CDSNQ15517 529 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 ANAPC10Q9UM13 185 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 F5H768 121 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8N7P7 452 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 D6R8Y8 96 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 J3QR89 54 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SPRY2O43597 315 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CD28P10747 220 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 YPEL3P61236 119 aaPredicted RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CIRBPQ14011 172 aaKnown RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SRSF8Q9BRL6 282 aaKnown RBP8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 TANC2Q9HCD6 1990 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 ATP5LO75964 103 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 MALP21145 153 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 C17orf77Q96MU5 243 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CCL24O00175 119 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CRPP02741 224 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CD5P06127 495 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 ELANEP08246 267 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 CXCL1P09341 107 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 UTF1Q5T230 341 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 AMN1Q8IY45 258 aa8.01□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12BA1L429 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 C9JQL5 133 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE7O76087 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12FP0CL80 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12GP0CL81 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12IP0CL82 117 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 CEP192Q8TEP8 1941 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 A6NDN8 102 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 RPL36AP83881 106 aaKnown RBP8□□□□□ -1.13
SMARCA1-205ENST00000617310 TMEM75Q8N9X5 138 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 RPL36ALQ969Q0 106 aaKnown RBP8□□□□□ -1.13
SMARCA1-205ENST00000617310 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A096LPF7 62 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 TRAV1-1A0A0B4J248 108 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 C8orf49Q96NF6 230 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 GGTLC3B5MD39 225 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 Q86TA4 180 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 DSCAML1Q8TD84 2053 aa8□□□□□ -1.13
SMARCA1-205ENST00000617310 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 TRBV19A0A075B6N1 114 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 F2Z2F3 143 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CACNG7P62955 275 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST2H2BDQ6DRA6 164 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 NDUFA4O00483 81 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 PRADC1Q9BSG0 188 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 CFAP161Q6P656 301 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 ZNF491Q8N8L2 437 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 MCRIP2Q9BUT9 160 aaKnown RBP7.99□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A087WWC5 75 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 TMEM213A2RRL7 107 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 APOMO95445 188 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LINC00614P0C842 121 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LMO4P61968 165 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 APRG1Q8IVJ8 170 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE12JA6NER3 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 HOXA5P20719 270 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE1Q13065 139 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE4Q13068 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE5Q13069 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 KRTAP27-1Q3LI81 207 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 Q8N9W7 124 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 AJUBAQ96IF1 538 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 A0A1B0GW15 77 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 CIDEAO60543 219 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 PKIAP61925 76 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 LINC00469Q8N7U9 141 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLV2-23P01705 113 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 VGLL1Q99990 258 aa7.98□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BKO60814 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BJP06899 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BOP23527 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BBP33778 126 aa7.97□□□□□ -1.13
SMARCA1-205ENST00000617310 HIST1H2BDP58876 126 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms