RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 DEFB130AP0DP74 79 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 HTN3P15516 51 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 M6PRP20645 277 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 RANP62826 216 aaKnown RBP13.64□□□□□ -0.23
TCF3-219ENST00000610756 ZNF266Q14584 549 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 RGS21Q2M5E4 152 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 Q5BKY6 102 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 PHYHIPLQ96FC7 376 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 PYGO2Q9BRQ0 406 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 J3KRW8 73 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 CRISP2P16562 243 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 TMEM78Q5T7P6 136 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
TCF3-219ENST00000610756 ZNF324O75467 553 aaPredicted RBP13.63□□□□□ -0.23
TCF3-219ENST00000610756 UBE2L3P68036 154 aaKnown RBP13.63□□□□□ -0.23
TCF3-219ENST00000610756 VGLL1Q99990 258 aa13.63□□□□□ -0.23
TCF3-219ENST00000610756 NOP10Q9NPE3 64 aaKnown RBP13.63□□□□□ -0.23
TCF3-219ENST00000610756 DNAH6Q9C0G6 4158 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 IGKV2-40A0A087WW87 121 aaPredicted RBP13.62□□□□□ -0.23
TCF3-219ENST00000610756 TRBV7-9A0A0J9YWB2 115 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 C7orf71A4D174 169 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 RBAKDNA6NC62 111 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 IGKV2D-40P01614 121 aaPredicted RBP13.62□□□□□ -0.23
TCF3-219ENST00000610756 CSN1S1P47710 185 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 OR2G3Q8NGZ4 309 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 LINC00467Q9BRT7 94 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 Q9H3A6 140 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 ZNF492Q9P255 531 aa13.62□□□□□ -0.23
TCF3-219ENST00000610756 ATP5G1P05496 136 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 GPX1P07203 203 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
TCF3-219ENST00000610756 ATP5G3P48201 142 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 ZNF138P52744 262 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 CD300CQ08708 224 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 TMEM88Q6PEY1 159 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 INO80EQ8NBZ0 244 aaPredicted RBP13.61□□□□□ -0.23
TCF3-219ENST00000610756 OR10G4Q8NGN3 311 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 OR10G9Q8NGN4 311 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 OR10G7Q8NGN6 311 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 RXFP4Q8TDU9 374 aa13.61□□□□□ -0.23
TCF3-219ENST00000610756 PSMG3Q9BT73 122 aaPredicted RBP13.61□□□□□ -0.23
TCF3-219ENST00000610756 FRAS1Q86XX4 4008 aa13.6□□□□□ -0.23
TCF3-219ENST00000610756 RAB2AP61019 212 aa13.6□□□□□ -0.23
TCF3-219ENST00000610756 SERF2P84101 59 aa13.6□□□□□ -0.23
TCF3-219ENST00000610756 ZFAND2AQ8N6M9 145 aa13.6□□□□□ -0.23
TCF3-219ENST00000610756 LINC00612Q8N6U2 182 aa13.6□□□□□ -0.23
TCF3-219ENST00000610756 DAZ2Q13117 558 aaKnown RBP13.59□□□□□ -0.23
TCF3-219ENST00000610756 BTN1A1Q13410 526 aa13.59□□□□□ -0.23
TCF3-219ENST00000610756 ARL6IP6Q8N6S5 226 aa13.59□□□□□ -0.23
TCF3-219ENST00000610756 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
TCF3-219ENST00000610756 HSD17B11Q8NBQ5 300 aa13.59□□□□□ -0.23
TCF3-219ENST00000610756 BIRC6Q9NR09 4857 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 SNURFLB1AK76 121 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 DIRC3C9JPN6 131 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 F5H768 121 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 EIF3GO75821 320 aaKnown RBP eCLIP13.58□□□□□ -0.24
TCF3-219ENST00000610756 ATP6V0CP27449 155 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 ANXA2RQ3ZCQ2 193 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 OR2T35Q8NGX2 323 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 OTORQ9NRC9 128 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 TNFSF18Q9UNG2 199 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 DNAH10Q8IVF4 4471 aa13.58□□□□□ -0.24
TCF3-219ENST00000610756 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 PGPA6NDG6 321 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 MBP02144 154 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 RNF212Q495C1 297 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 FAM74A1Q5RGS3 127 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 EIF4E3Q8N5X7 224 aaKnown RBP13.57□□□□□ -0.24
TCF3-219ENST00000610756 LENEPQ9Y5L5 61 aa13.57□□□□□ -0.24
TCF3-219ENST00000610756 STAG3L2P0CL84 134 aa13.56□□□□□ -0.24
TCF3-219ENST00000610756 STAG3L3P0CL85 134 aa13.56□□□□□ -0.24
TCF3-219ENST00000610756 ZNF680Q8NEM1 530 aa13.56□□□□□ -0.24
TCF3-219ENST00000610756 TMED6Q8WW62 240 aa13.56□□□□□ -0.24
TCF3-219ENST00000610756 HYLS1Q96M11 299 aa13.56□□□□□ -0.24
TCF3-219ENST00000610756 FXYD6-FXYD2A0A087WZ82 144 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
TCF3-219ENST00000610756 CDC34P49427 236 aaPredicted RBP13.55□□□□□ -0.24
TCF3-219ENST00000610756 PRR9Q5T870 116 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 CMTM2Q8TAZ6 248 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 SUN5Q8TC36 379 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 RAB24Q969Q5 203 aa13.55□□□□□ -0.24
TCF3-219ENST00000610756 GNPNAT1Q96EK6 184 aaPredicted RBP13.55□□□□□ -0.24
TCF3-219ENST00000610756 RPL7L1Q6DKI1 246 aaKnown RBP13.54□□□□□ -0.24
TCF3-219ENST00000610756 Q8TAT8 98 aa13.54□□□□□ -0.24
TCF3-219ENST00000610756 GSN-AS1Q9NRJ2 163 aa13.54□□□□□ -0.24
TCF3-219ENST00000610756 BORCS7-ASMTA0A0B4J1R7 106 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 GAGE12BA1L429 117 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 G3V3Q6 166 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 RGS13O14921 159 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 GAGE7O76087 117 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 GAGE12FP0CL80 117 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 GAGE12GP0CL81 117 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 UBE2DNLQ8IWF7 75 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 SH3BGRL3Q9H299 93 aa13.53□□□□□ -0.24
TCF3-219ENST00000610756 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms