RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 Q86TA4 180 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 BAGE2Q86Y30 109 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 SMIM12Q96EX1 92 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 VGLL1Q99990 258 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 SAV1Q9H4B6 383 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-212ENST00000601919 LY96Q9Y6Y9 160 aa13.84□□□□□ -0.19
SSBP4-212ENST00000601919 SORL1Q92673 2214 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 A0A0J9YX75 114 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 ATP6V1G1O75348 118 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 IGLV2-11P01706 119 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 ZNF138P52744 262 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 ODF3L2Q3SX64 289 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 SGK494Q96LW2 274 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 AGPAT4-IT1Q9H0P7 198 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 PPP1R14DQ9NXH3 145 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
SSBP4-212ENST00000601919 LENEPQ9Y5L5 61 aa13.83□□□□□ -0.2
SSBP4-212ENST00000601919 LTAP01374 205 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 ADCYAP1P18509 176 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 S100A1P23297 94 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 PNRC1Q12796 327 aaPredicted RBP13.82□□□□□ -0.2
SSBP4-212ENST00000601919 ERCC8Q13216 396 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 IGF2BP2-AS1Q96M15 143 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
SSBP4-212ENST00000601919 VWFP04275 2813 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 TRBV7-9A0A0J9YWB2 115 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 F6UB75 175 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 PRB4P10163 310 aaPredicted RBP13.81□□□□□ -0.2
SSBP4-212ENST00000601919 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 TVP23CQ96ET8 276 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
SSBP4-212ENST00000601919 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
SSBP4-212ENST00000601919 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
SSBP4-212ENST00000601919 ZNF705DP0CH99 300 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-212ENST00000601919 ZNF705BP0CI00 300 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-212ENST00000601919 TMEM183AQ8IXX5 376 aa13.8□□□□□ -0.2
SSBP4-212ENST00000601919 ODF3Q96PU9 254 aa13.8□□□□□ -0.2
SSBP4-212ENST00000601919 SDF2L1Q9HCN8 221 aa13.8□□□□□ -0.2
SSBP4-212ENST00000601919 APOC3P02656 99 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 CD7P09564 240 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 DEFB1P60022 68 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 GDF5OSQ5U4N7 250 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 APRG1Q8IVJ8 170 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 SVBPQ8N300 66 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 Q8TAT8 98 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 PRR25Q96S07 402 aa13.79□□□□□ -0.2
SSBP4-212ENST00000601919 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 H3BMM0 161 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 CT45A10P0DMU9 189 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 MGST1P10620 155 aaKnown RBP13.78□□□□□ -0.2
SSBP4-212ENST00000601919 TSPOP30536 169 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 LINC01551Q86U37 167 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 STHQ8IWL8 128 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 OCC1Q8TAD7 63 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
SSBP4-212ENST00000601919 M0R036 132 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 LEPP41159 167 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 RPL23P62829 140 aaKnown RBP13.77□□□□□ -0.21
SSBP4-212ENST00000601919 EGFEM1PQ0D2K5 195 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 ADIRFQ15847 76 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 SMUG1Q53HV7 270 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 MLST8Q9BVC4 326 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 C19orf73Q9NVV2 129 aa13.77□□□□□ -0.21
SSBP4-212ENST00000601919 PGPEP1LA6NFU8 196 aa13.76□□□□□ -0.21
SSBP4-212ENST00000601919 A8MTW9 85 aa13.76□□□□□ -0.21
SSBP4-212ENST00000601919 SNAPINO95295 136 aa13.76□□□□□ -0.21
SSBP4-212ENST00000601919 COX8CQ7Z4L0 72 aa13.76□□□□□ -0.21
SSBP4-212ENST00000601919 NHLRC2Q8NBF2 726 aa13.76□□□□□ -0.21
SSBP4-212ENST00000601919 B4DEV8 164 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 GCGP01275 180 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 IGKV3-20P01619 116 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 IGLV2-8P01709 118 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 CRISP2P16562 243 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 NUTF2P61970 127 aaKnown RBP13.75□□□□□ -0.21
SSBP4-212ENST00000601919 ZNF124Q15973 351 aa13.75□□□□□ -0.21
SSBP4-212ENST00000601919 GPX1P07203 203 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 FAM19A4Q96LR4 140 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 C8orf49Q96NF6 230 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 ASCL2Q99929 193 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 AURKAIP1Q9NWT8 199 aaPredicted RBP13.74□□□□□ -0.21
SSBP4-212ENST00000601919 AGRNO00468 2067 aa13.74□□□□□ -0.21
SSBP4-212ENST00000601919 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
SSBP4-212ENST00000601919 CLRN3Q8NCR9 226 aa13.73□□□□□ -0.21
SSBP4-212ENST00000601919 ISOC2Q96AB3 205 aa13.73□□□□□ -0.21
SSBP4-212ENST00000601919 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
SSBP4-212ENST00000601919 ZC2HC1AQ96GY0 325 aa13.73□□□□□ -0.21
SSBP4-212ENST00000601919 K7EN84 100 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 AMBPP02760 352 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 CDKN1BP46527 198 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 RHEBQ15382 184 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 FAM162BQ5T6X4 162 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 PRR27Q6MZM9 219 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 C15orf54Q8N8G6 183 aa13.72□□□□□ -0.21
SSBP4-212ENST00000601919 KLLNB2CW77 178 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms