RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 ZNF767PQ75MW2 155 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 AKAP14Q86UN6 197 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 SUN5Q8TC36 379 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 FAM19A4Q96LR4 140 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 ODF3Q96PU9 254 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 LINC01587Q99440 93 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 CTXND1A0A1B0GTU2 59 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 DIRC3C9JPN6 131 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 PFDN1O60925 122 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 CXorf1O96002 111 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 C1QBP02746 253 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 AZU1P20160 251 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 LEPP41159 167 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 FHITP49789 147 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 RRN3P1Q2M238 152 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 Q8TAT8 98 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 TMPRSS5Q9H3S3 457 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 RPH3ALQ9UNE2 315 aa14.39□□□□□ -0.11
SSBP4-210ENST00000601444 TRAV12-3A0A0B4J271 114 aa14.38□□□□□ -0.11
SSBP4-210ENST00000601444 HTN1P15515 57 aa14.38□□□□□ -0.11
SSBP4-210ENST00000601444 FGF8P55075 233 aaPredicted RBP14.38□□□□□ -0.11
SSBP4-210ENST00000601444 TMEM78Q5T7P6 136 aa14.38□□□□□ -0.11
SSBP4-210ENST00000601444 IQCF2Q8IXL9 164 aa14.38□□□□□ -0.11
SSBP4-210ENST00000601444 PHLDA1Q8WV24 401 aaPredicted RBP14.38□□□□□ -0.11
SSBP4-210ENST00000601444 SEC11BP0C7V7 166 aa14.37□□□□□ -0.11
SSBP4-210ENST00000601444 GNG5P63218 68 aa14.37□□□□□ -0.11
SSBP4-210ENST00000601444 RXFP4Q8TDU9 374 aa14.37□□□□□ -0.11
SSBP4-210ENST00000601444 ZNF492Q9P255 531 aa14.37□□□□□ -0.11
SSBP4-210ENST00000601444 DYNC2H1Q8NCM8 4307 aaKnown RBP14.37□□□□□ -0.11
SSBP4-210ENST00000601444 ZNF138P52744 262 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 BTN1A1Q13410 526 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 C12orf74Q32Q52 190 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 PRR9Q5T870 116 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 CEMP1Q6PRD7 247 aaPredicted RBP14.36□□□□□ -0.11
SSBP4-210ENST00000601444 CMTM2Q8TAZ6 248 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 TMEM167BQ9NRX6 74 aa14.36□□□□□ -0.11
SSBP4-210ENST00000601444 YTHDF2Q9Y5A9 579 aaKnown RBP14.36□□□□□ -0.11
SSBP4-210ENST00000601444 TMEM189A5PLL7 270 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 RBAKDNA6NC62 111 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 KLLNB2CW77 178 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 SLC25A5P05141 298 aaKnown RBP14.35□□□□□ -0.11
SSBP4-210ENST00000601444 RNASE4P34096 147 aaKnown RBP14.35□□□□□ -0.11
SSBP4-210ENST00000601444 TAS2R60P59551 318 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 FAM74A1Q5RGS3 127 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 Q6ZQT7 251 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 Q6ZTC4 211 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 TMEM256Q8N2U0 113 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 ZFAND2AQ8N6M9 145 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 TMED6Q8WW62 240 aa14.35□□□□□ -0.11
SSBP4-210ENST00000601444 PLECQ15149 4684 aaKnown RBP14.35□□□□□ -0.11
SSBP4-210ENST00000601444 TENM2Q9NT68 2774 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 PLAC8L1A1L4L8 177 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 MAP1LC3B2A6NCE7 125 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 H7BYZ3 331 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 CRISP2P16562 243 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 SUMO1P63165 101 aaKnown RBP14.34□□□□□ -0.11
SSBP4-210ENST00000601444 FAM222AQ5U5X8 452 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 GOLT1AQ6ZVE7 132 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 C20orf144Q9BQM9 153 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 MAP1LC3BQ9GZQ8 125 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 DKK2Q9UBU2 259 aa14.34□□□□□ -0.11
SSBP4-210ENST00000601444 TRAV8-1A0A0A6YYK1 113 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 C7orf71A4D174 169 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 NUPR2A6NF83 97 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 GGTLC3B5MD39 225 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 ZNF324O75467 553 aaPredicted RBP14.33□□□□□ -0.12
SSBP4-210ENST00000601444 GPX1P07203 203 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 SPART-AS1P0CW21 52 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
SSBP4-210ENST00000601444 UBE2G2P60604 165 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 SGK494Q96LW2 274 aa14.33□□□□□ -0.12
SSBP4-210ENST00000601444 EIF5AP63241 154 aaKnown RBP14.32□□□□□ -0.12
SSBP4-210ENST00000601444 STOML3Q8TAV4 291 aa14.32□□□□□ -0.12
SSBP4-210ENST00000601444 FAM213BQ8TBF2 198 aa14.32□□□□□ -0.12
SSBP4-210ENST00000601444 NIPSNAP3BQ9BS92 247 aa14.32□□□□□ -0.12
SSBP4-210ENST00000601444 ARL6IP6Q8N6S5 226 aa14.31□□□□□ -0.12
SSBP4-210ENST00000601444 A0A1W2PRE2 83 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 TCRAP04437 139 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 NMBP08949 121 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 C9orf62Q8N4C0 152 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 C5orf17Q8NAS9 161 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 RNASE8Q8TDE3 154 aaKnown RBP14.3□□□□□ -0.12
SSBP4-210ENST00000601444 TVP23CQ96ET8 276 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 EPDR1Q9UM22 224 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 LYSTQ99698 3801 aa14.3□□□□□ -0.12
SSBP4-210ENST00000601444 A0A1B0GV50 99 aa14.29□□□□□ -0.12
SSBP4-210ENST00000601444 SFT2D1Q8WV19 159 aa14.29□□□□□ -0.12
SSBP4-210ENST00000601444 MBD3L1Q8WWY6 194 aa14.29□□□□□ -0.12
SSBP4-210ENST00000601444 C16orf74Q96GX8 76 aa14.29□□□□□ -0.12
SSBP4-210ENST00000601444 SACSQ9NZJ4 4579 aa14.28□□□□□ -0.12
SSBP4-210ENST00000601444 TRBV7-9A0A0J9YWB2 115 aa14.28□□□□□ -0.12
SSBP4-210ENST00000601444 FAM74A7A6NL05 159 aa14.28□□□□□ -0.12
SSBP4-210ENST00000601444 ZFP69Q49AA0 526 aa14.28□□□□□ -0.12
SSBP4-210ENST00000601444 TMEM263Q8WUH6 116 aaKnown RBP14.28□□□□□ -0.12
SSBP4-210ENST00000601444 PYGO2Q9BRQ0 406 aa14.28□□□□□ -0.12
SSBP4-210ENST00000601444 KLK5Q9Y337 293 aaPredicted RBP14.28□□□□□ -0.12
SSBP4-210ENST00000601444 TRAV10A0A0B4J240 114 aa14.27□□□□□ -0.13
SSBP4-210ENST00000601444 C11orf94C9JXX5 98 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms