RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 KIR2DL5BA0A0G2JPC4 375 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 IGHV3-11P01762 117 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 SSTP61278 116 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 UNQ9165/PRO28630Q6UXU0 137 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 KIR2DL5AQ8N109 375 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 A0A096LNT2 108 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 TRAV8-2A0A0B4J237 113 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 LYZL1Q6UWQ5 148 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 M0R2Z0 102 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 LCNL1Q6ZST4 164 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 C8orf86Q6ZUL3 223 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 LINC01356Q8N9X3 169 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 BORCS7Q96B45 105 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 NDUFAF3Q9BU61 184 aa16.59■□□□□ 0.25
GRAMD1A-212ENST00000600231 ABCA12Q86UK0 2595 aa16.58■□□□□ 0.25
GRAMD1A-212ENST00000600231 PF4V1P10720 104 aa16.58■□□□□ 0.25
GRAMD1A-212ENST00000600231 BRI3O95415 125 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 BMI1P35226 326 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 GATD1Q8NB37 220 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 USMG5Q96IX5 58 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 PAM16Q9Y3D7 125 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 H3BUA1 57 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 ZNF575Q86XF7 245 aa16.57■□□□□ 0.24
GRAMD1A-212ENST00000600231 MUC21A0A0G2JKD1 596 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 MUC21A0A140T8X8 626 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 A0A1B0GW15 77 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 RBAKDNA6NC62 111 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 MUC21Q5SSG8 566 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 PMCHL1Q16048 86 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 VAMP8Q9BV40 100 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 AGPAT4-IT1Q9H0P7 198 aa16.56■□□□□ 0.24
GRAMD1A-212ENST00000600231 TMEM213A2RRL7 107 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 FAM181BA6NEQ2 426 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 SMAD7O15105 426 aaKnown RBP16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 TGFAP01135 160 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 DEFB112Q30KQ8 113 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 IL17RELQ6ZVW7 336 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 GLMPQ8WWB7 406 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 NDUFA4O00483 81 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 ZNF138P52744 262 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 NAV2Q8IVL1 2488 aa16.55■□□□□ 0.24
GRAMD1A-212ENST00000600231 IGLV1-40P01703 118 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 IGHV4-59P01825 116 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 LINC00614P0C842 121 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 EBLN2Q6P2I7 272 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 OR4X2Q8NGF9 303 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 FABP5P3A8MUU1 101 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 ORM1P02763 201 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 KRTAP10-9P60411 292 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 ZNF493Q6ZR52 646 aa16.54■□□□□ 0.24
GRAMD1A-212ENST00000600231 TMEM95Q3KNT9 176 aa16.53■□□□□ 0.24
GRAMD1A-212ENST00000600231 CHCHD1Q96BP2 118 aaKnown RBP16.53■□□□□ 0.24
GRAMD1A-212ENST00000600231 RPS20P60866 119 aaKnown RBP16.52■□□□□ 0.24
GRAMD1A-212ENST00000600231 FER1L6-AS1Q8NA97 138 aa16.52■□□□□ 0.24
GRAMD1A-212ENST00000600231 C16orf92Q96LL3 132 aa16.52■□□□□ 0.24
GRAMD1A-212ENST00000600231 C20orf144Q9BQM9 153 aa16.52■□□□□ 0.24
GRAMD1A-212ENST00000600231 C2orf70A6NJV1 201 aa16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 CSN3P07498 182 aa16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 CFHR3Q02985 330 aa16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 MRPL53Q96EL3 112 aaKnown RBP16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 CLEC5AQ9NY25 188 aa16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 DOPEY2Q9Y3R5 2298 aa16.52■□□□□ 0.23
GRAMD1A-212ENST00000600231 IGHV1-24A0A0C4DH33 117 aa16.51■□□□□ 0.23
GRAMD1A-212ENST00000600231 RNF223E7ERA6 249 aa16.51■□□□□ 0.23
GRAMD1A-212ENST00000600231 IGLC6P0CF74 106 aa16.51■□□□□ 0.23
GRAMD1A-212ENST00000600231 PSMG3-AS1Q96PY0 264 aa16.51■□□□□ 0.23
GRAMD1A-212ENST00000600231 CTRLP40313 264 aa16.51■□□□□ 0.23
GRAMD1A-212ENST00000600231 TMEM78Q5T7P6 136 aa16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 GPHB5Q86YW7 130 aa16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 AMN1Q8IY45 258 aa16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 A0A0G2JLM5 398 aa16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 SRSF2Q01130 221 aaKnown RBP16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 NPFFR1Q9GZQ6 430 aa16.5■□□□□ 0.23
GRAMD1A-212ENST00000600231 BTF3P20290 206 aaKnown RBP16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 C20orf173Q96LM9 149 aa16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 CREBBPQ92793 2442 aa16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 J3QLI3 93 aa16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 FAM104BQ5XKR9 115 aa16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 C9orf47Q6ZRZ4 202 aa16.49■□□□□ 0.23
GRAMD1A-212ENST00000600231 TWIST1Q15672 202 aa16.48■□□□□ 0.23
GRAMD1A-212ENST00000600231 LINC01559Q495D7 138 aa16.48■□□□□ 0.23
GRAMD1A-212ENST00000600231 C9orf139Q6ZV77 190 aa16.48■□□□□ 0.23
GRAMD1A-212ENST00000600231 ATOH7Q8N100 152 aa16.48■□□□□ 0.23
GRAMD1A-212ENST00000600231 D6R8Y8 96 aa16.47■□□□□ 0.23
GRAMD1A-212ENST00000600231 LOXL1Q08397 574 aaPredicted RBP16.47■□□□□ 0.23
GRAMD1A-212ENST00000600231 LINC00173Q6ZV60 143 aa16.47■□□□□ 0.23
GRAMD1A-212ENST00000600231 C11orf21Q9P2W6 132 aa16.47■□□□□ 0.23
GRAMD1A-212ENST00000600231 MSRB1Q9NZV6 116 aa16.47■□□□□ 0.23
GRAMD1A-212ENST00000600231 IGKV3D-20A0A0C4DH25 116 aa16.46■□□□□ 0.23
GRAMD1A-212ENST00000600231 TM4SF20Q53R12 229 aa16.46■□□□□ 0.23
GRAMD1A-212ENST00000600231 MIEN1Q9BRT3 115 aa16.46■□□□□ 0.23
GRAMD1A-212ENST00000600231 MXRA5Q9NR99 2828 aa16.46■□□□□ 0.23
GRAMD1A-212ENST00000600231 LEPROTL1O95214 131 aa16.46■□□□□ 0.22
GRAMD1A-212ENST00000600231 C10orf99Q6UWK7 81 aa16.46■□□□□ 0.22
GRAMD1A-212ENST00000600231 SPATA12Q7Z6I5 190 aa16.46■□□□□ 0.22
GRAMD1A-212ENST00000600231 ZNF738Q8NE65 137 aa16.46■□□□□ 0.22
GRAMD1A-212ENST00000600231 CR1P17927 2039 aa16.45■□□□□ 0.22
GRAMD1A-212ENST00000600231 SPATA45Q537H7 98 aa16.45■□□□□ 0.22
GRAMD1A-212ENST00000600231 ZNF705AQ6ZN79 300 aaPredicted RBP16.45■□□□□ 0.22
GRAMD1A-212ENST00000600231 SOCS3O14543 225 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms