RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
LIG1-217ENST00000599165 KCNIP2Q9NS61 270 aa8.53□□□□□ -1.04
LIG1-217ENST00000599165 PRELID1Q9Y255 219 aa8.53□□□□□ -1.04
LIG1-217ENST00000599165 TIMM9Q9Y5J7 89 aa8.53□□□□□ -1.04
LIG1-217ENST00000599165 HERC2O95714 4834 aa8.53□□□□□ -1.04
LIG1-217ENST00000599165 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 P0DMU3 169 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 FAM231AP0DMU4 169 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 FAM231CP0DMU5 169 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 CRISP2P16562 243 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 LEPP41159 167 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 BTN1A1Q13410 526 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 ZNF493Q6ZR52 646 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 C11orf72Q8NBR9 251 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 RNF141Q8WVD5 230 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 TIMM8BQ9Y5J9 83 aaPredicted RBP8.52□□□□□ -1.05
LIG1-217ENST00000599165 MUC4Q99102 2169 aa8.52□□□□□ -1.05
LIG1-217ENST00000599165 PKD1P98161 4303 aa8.51□□□□□ -1.05
LIG1-217ENST00000599165 C7orf71A4D174 169 aa8.51□□□□□ -1.05
LIG1-217ENST00000599165 CBY3A6NI87 242 aa8.51□□□□□ -1.05
LIG1-217ENST00000599165 LINC00477Q96M19 166 aa8.51□□□□□ -1.05
LIG1-217ENST00000599165 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
LIG1-217ENST00000599165 G3V3Q6 166 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 SLC25A5P05141 298 aaKnown RBP8.5□□□□□ -1.05
LIG1-217ENST00000599165 RAB2AP61019 212 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 Q6ZR54 194 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 Q8TAT8 98 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 PYGO2Q9BRQ0 406 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 Q9H3A6 140 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 ZNF492Q9P255 531 aa8.5□□□□□ -1.05
LIG1-217ENST00000599165 F5H768 121 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 RTL8CO15255 209 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 OR7C2O60412 319 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 IFNA5P01569 189 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 ATP5G1P05496 136 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 HOXA5P20719 270 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 ATP5G3P48201 142 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 RANP62826 216 aaKnown RBP8.49□□□□□ -1.05
LIG1-217ENST00000599165 UBE2L3P68036 154 aaKnown RBP8.49□□□□□ -1.05
LIG1-217ENST00000599165 SCGB1C1Q8TD33 95 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 AQP10Q96PS8 301 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 MED28Q9H204 178 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
LIG1-217ENST00000599165 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 RNF222A6NCQ9 220 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 M0R2N4 97 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 NMBP08949 121 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 RNASE4P34096 147 aaKnown RBP8.48□□□□□ -1.05
LIG1-217ENST00000599165 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
LIG1-217ENST00000599165 RNF212Q495C1 297 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 Q6ZTI0 123 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 C15orf53Q8NAA6 179 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 GSN-AS1Q9NRJ2 163 aa8.48□□□□□ -1.05
LIG1-217ENST00000599165 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 DIRC3C9JPN6 131 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 HMGB3O15347 200 aaKnown RBP8.47□□□□□ -1.05
LIG1-217ENST00000599165 GAGE7O76087 117 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 GIPP09681 153 aaPredicted RBP8.47□□□□□ -1.05
LIG1-217ENST00000599165 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 M6PRP20645 277 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 ZNF138P52744 262 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 ANXA2RQ3ZCQ2 193 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 KHDC3LQ587J8 217 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 LYPD1Q8N2G4 141 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 OR2G3Q8NGZ4 309 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 KLF12Q9Y4X4 402 aa8.47□□□□□ -1.05
LIG1-217ENST00000599165 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 RBAKDNA6NC62 111 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 GPX1P07203 203 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 ATP6V0CP27449 155 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 TMEM78Q5T7P6 136 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 CCDC28AQ8IWP9 274 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 HSD17B11Q8NBQ5 300 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 SH3BGRL3Q9H299 93 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
LIG1-217ENST00000599165 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 TCL1AP56279 114 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 TAS2R45P59539 299 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 ZNF266Q14584 549 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 ACOT6Q3I5F7 207 aaPredicted RBP8.45□□□□□ -1.06
LIG1-217ENST00000599165 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 UBE2DNLQ8IWF7 75 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 EIF4E3Q8N5X7 224 aaKnown RBP8.45□□□□□ -1.06
LIG1-217ENST00000599165 OR10G4Q8NGN3 311 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 OR10G9Q8NGN4 311 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 OR10G7Q8NGN6 311 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 SUN5Q8TC36 379 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 PSMG3Q9BT73 122 aaPredicted RBP8.45□□□□□ -1.06
LIG1-217ENST00000599165 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms