RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZNF493Q6ZR52 646 aa13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 TMEM263Q8WUH6 116 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 FAM210BQ96KR6 192 aa13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 ZNF324O75467 553 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 SLC25A5P05141 298 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 TAS2R45P59539 299 aa13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 RAB2AP61019 212 aa13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 UBE2L3P68036 154 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
SHKBP1-202ENST00000593764 CRISP2P16562 243 aa13.05□□□□□ -0.32
SHKBP1-202ENST00000593764 CD300CQ08708 224 aa13.05□□□□□ -0.32
SHKBP1-202ENST00000593764 ZNF266Q14584 549 aa13.05□□□□□ -0.32
SHKBP1-202ENST00000593764 Q9H3A6 140 aa13.05□□□□□ -0.32
SHKBP1-202ENST00000593764 NOP10Q9NPE3 64 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-202ENST00000593764 C7orf71A4D174 169 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 G3V3Q6 166 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 BTN1A1Q13410 526 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 ZFAND2AQ8N6M9 145 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 OR10G4Q8NGN3 311 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 OR10G7Q8NGN6 311 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 PYGO2Q9BRQ0 406 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
SHKBP1-202ENST00000593764 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 NMBP08949 121 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 ATP6V0CP27449 155 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 PRR9Q5T870 116 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
SHKBP1-202ENST00000593764 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 CBY3A6NI87 242 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 P0DMU3 169 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 LINC00612Q8N6U2 182 aa13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 INO80EQ8NBZ0 244 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 PSMG3Q9BT73 122 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-202ENST00000593764 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 FXYD6-FXYD2A0A087WZ82 144 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 HMGB3O15347 200 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 GPX1P07203 203 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 CSN1S1P47710 185 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 ZNF138P52744 262 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 Q6ZQT7 251 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 POM121L12Q8N7R1 296 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 Q8TAT8 98 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 SH3BGRL3Q9H299 93 aa13.01□□□□□ -0.33
SHKBP1-202ENST00000593764 TRBV7-9A0A0J9YWB2 115 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 PGPA6NDG6 321 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 ATP5G1P05496 136 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 ATP5G3P48201 142 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 SERF2P84101 59 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
SHKBP1-202ENST00000593764 OTORQ9NRC9 128 aa13□□□□□ -0.33
SHKBP1-202ENST00000593764 F5H768 121 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 DAZ2Q13117 558 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
SHKBP1-202ENST00000593764 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
SHKBP1-202ENST00000593764 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
SHKBP1-202ENST00000593764 ANXA2RQ3ZCQ2 193 aa12.98□□□□□ -0.33
SHKBP1-202ENST00000593764 SUN5Q8TC36 379 aa12.98□□□□□ -0.33
SHKBP1-202ENST00000593764 SNURFLB1AK76 121 aa12.97□□□□□ -0.33
SHKBP1-202ENST00000593764 MBP02144 154 aa12.97□□□□□ -0.33
SHKBP1-202ENST00000593764 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-202ENST00000593764 C15orf53Q8NAA6 179 aa12.97□□□□□ -0.33
SHKBP1-202ENST00000593764 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
SHKBP1-202ENST00000593764 DNAH2Q9P225 4427 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 GAGE12BA1L429 117 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 GAGE7O76087 117 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 GAGE12FP0CL80 117 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 GAGE12GP0CL81 117 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 GAGE12IP0CL82 117 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
SHKBP1-202ENST00000593764 BORCS7-ASMTA0A0B4J1R7 106 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 SMLR1H3BR10 107 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 GCHFRP30047 84 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 Q6ZTI0 123 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 ZNF680Q8NEM1 530 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms