RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PSMG4Q5JS54 123 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 FAM24BQ8N5W8 94 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 NHLRC2Q8NBF2 726 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 OR10J6PQ8NGY7 276 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 SMIM12Q96EX1 92 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 ZFP30Q9Y2G7 519 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 VWFP04275 2813 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 OR4C46A6NHA9 309 aa16.68■□□□□ 0.26
ATG4D-209ENST00000588857 SORL1Q92673 2214 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 K7EN84 100 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 IGLV2-8P01709 118 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 ERCC8Q13216 396 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 TMEM78Q5T7P6 136 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 ISOC2Q96AB3 205 aa16.67■□□□□ 0.26
ATG4D-209ENST00000588857 IGLV1-51P01701 117 aa16.66■□□□□ 0.26
ATG4D-209ENST00000588857 MT-ND4LP03901 98 aa16.66■□□□□ 0.26
ATG4D-209ENST00000588857 TMEM183AQ8IXX5 376 aa16.66■□□□□ 0.26
ATG4D-209ENST00000588857 OR2K2Q8NGT1 345 aa16.66■□□□□ 0.26
ATG4D-209ENST00000588857 IZUMO1RA6ND01 250 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 SCO1O75880 301 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 SAPCD1Q5SSQ6 148 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 C9orf47Q6ZRZ4 202 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 NDFIP1Q9BT67 221 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 TRRAPQ9Y4A5 3859 aa16.65■□□□□ 0.26
ATG4D-209ENST00000588857 GCGP01275 180 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 OR5I1Q13606 314 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 OR8A1Q8NGG7 326 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 Q8TAT8 98 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 MLST8Q9BVC4 326 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 AGPAT4-IT1Q9H0P7 198 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 BIN3Q9NQY0 253 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 ZNF705DP0CH99 300 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-209ENST00000588857 ZNF705BP0CI00 300 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-209ENST00000588857 ZNF138P52744 262 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 DEFB1P60022 68 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 HIST1H1AQ02539 215 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-209ENST00000588857 LINC00477Q96M19 166 aa16.64■□□□□ 0.25
ATG4D-209ENST00000588857 A0A087WWC5 75 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 F6UB75 175 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 CD33P20138 364 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 RNF212Q495C1 297 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 SFRP2Q96HF1 295 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 PRR25Q96S07 402 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 ASCL2Q99929 193 aa16.63■□□□□ 0.25
ATG4D-209ENST00000588857 NPIPB6E9PJ23 425 aa16.62■□□□□ 0.25
ATG4D-209ENST00000588857 INSL3P51460 131 aa16.62■□□□□ 0.25
ATG4D-209ENST00000588857 ERVFC1-1P60608 527 aa16.62■□□□□ 0.25
ATG4D-209ENST00000588857 PRR27Q6MZM9 219 aa16.62■□□□□ 0.25
ATG4D-209ENST00000588857 EBLN2Q6P2I7 272 aa16.62■□□□□ 0.25
ATG4D-209ENST00000588857 ZNF256Q9Y2P7 627 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-209ENST00000588857 PRR31Q5SQ13 230 aa16.61■□□□□ 0.25
ATG4D-209ENST00000588857 C9orf66Q5T8R8 295 aa16.61■□□□□ 0.25
ATG4D-209ENST00000588857 ANAPC16Q96DE5 110 aa16.61■□□□□ 0.25
ATG4D-209ENST00000588857 CTDSP1Q9GZU7 261 aa16.61■□□□□ 0.25
ATG4D-209ENST00000588857 ZNF492Q9P255 531 aa16.61■□□□□ 0.25
ATG4D-209ENST00000588857 PPP1R2P9O14990 202 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 DEFB131AP59861 70 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 C15orf54Q8N8G6 183 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 C8orf49Q96NF6 230 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 MCRIP2Q9BUT9 160 aaKnown RBP16.6■□□□□ 0.25
ATG4D-209ENST00000588857 NBEAL1Q6ZS30 2694 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 CT45A10P0DMU9 189 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 FOXI2Q6ZQN5 318 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 OR10G8Q8NGN5 311 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 GPR61Q9BZJ8 451 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 MAP6D1Q9H9H5 199 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 PPP1R14DQ9NXH3 145 aa16.6■□□□□ 0.25
ATG4D-209ENST00000588857 A0A0J9YX75 114 aa16.59■□□□□ 0.25
ATG4D-209ENST00000588857 H7BYZ3 331 aa16.59■□□□□ 0.25
ATG4D-209ENST00000588857 BTN1A1Q13410 526 aa16.59■□□□□ 0.25
ATG4D-209ENST00000588857 IBA57Q5T440 356 aaKnown RBP16.59■□□□□ 0.25
ATG4D-209ENST00000588857 ZC2HC1AQ96GY0 325 aa16.59■□□□□ 0.25
ATG4D-209ENST00000588857 RNASE7Q9H1E1 156 aaKnown RBP16.59■□□□□ 0.25
ATG4D-209ENST00000588857 SAV1Q9H4B6 383 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-209ENST00000588857 LENEPQ9Y5L5 61 aa16.59■□□□□ 0.25
ATG4D-209ENST00000588857 GDF5OSQ5U4N7 250 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 TMEM88Q6PEY1 159 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 WFDC9Q8NEX5 89 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 DAZAP1Q96EP5 407 aaKnown RBP16.58■□□□□ 0.24
ATG4D-209ENST00000588857 OSTCQ9NRP0 149 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 SMCO4Q9NRQ5 59 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 TMEM242Q9NWH2 141 aa16.58■□□□□ 0.24
ATG4D-209ENST00000588857 DUSP14O95147 198 aaKnown RBP16.57■□□□□ 0.24
ATG4D-209ENST00000588857 CMC4P56277 68 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-209ENST00000588857 SMUG1Q53HV7 270 aa16.57■□□□□ 0.24
ATG4D-209ENST00000588857 COX8CQ7Z4L0 72 aa16.57■□□□□ 0.24
ATG4D-209ENST00000588857 AGRNO00468 2067 aa16.57■□□□□ 0.24
ATG4D-209ENST00000588857 MGAM2Q2M2H8 2515 aa16.56■□□□□ 0.24
ATG4D-209ENST00000588857 FAM231DQ6ZW35 169 aa16.56■□□□□ 0.24
ATG4D-209ENST00000588857 CBLN2Q8IUK8 224 aa16.56■□□□□ 0.24
ATG4D-209ENST00000588857 NOTCH3Q9UM47 2321 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 OR11H12B2RN74 326 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 ACTL10Q5JWF8 245 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 NUDT10Q8NFP7 164 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 OR4B1Q8NGF8 309 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 NUDT11Q96G61 164 aa16.55■□□□□ 0.24
ATG4D-209ENST00000588857 TRBV7-9A0A0J9YWB2 115 aa16.54■□□□□ 0.24
ATG4D-209ENST00000588857 CXorf65A6NEN9 183 aa16.54■□□□□ 0.24
ATG4D-209ENST00000588857 ZNF705GA8MUZ8 300 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-209ENST00000588857 P01737 135 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms