RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 PFDN1O60925 122 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 TAS2R60P59551 318 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 ZFAND6Q6FIF0 208 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 DPPA3Q6W0C5 159 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 STOML3Q8TAV4 291 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 CMTM2Q8TAZ6 248 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
VAT1-204ENST00000587147 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
VAT1-204ENST00000587147 TENM2Q9NT68 2774 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 KLLNB2CW77 178 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 TPT1P13693 172 aaKnown RBP12.15□□□□□ -0.46
VAT1-204ENST00000587147 ZNF138P52744 262 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 GFI1BQ5VTD9 330 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 CEMP1Q6PRD7 247 aaPredicted RBP12.15□□□□□ -0.46
VAT1-204ENST00000587147 ZNF493Q6ZR52 646 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
VAT1-204ENST00000587147 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
VAT1-204ENST00000587147 KLK5Q9Y337 293 aaPredicted RBP12.15□□□□□ -0.46
VAT1-204ENST00000587147 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 LOC102723971A0A1B0GUV8 181 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 PGPA6NDG6 321 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 DEFB4AO15263 64 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
VAT1-204ENST00000587147 EIF5AL1Q6IS14 154 aaKnown RBP12.14□□□□□ -0.47
VAT1-204ENST00000587147 LINC01587Q99440 93 aa12.14□□□□□ -0.47
VAT1-204ENST00000587147 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
VAT1-204ENST00000587147 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
VAT1-204ENST00000587147 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
VAT1-204ENST00000587147 ERCC8Q13216 396 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 ZNF726P1Q15940 193 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 C5orf17Q8NAS9 161 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 PHLDA1Q8WV24 401 aaPredicted RBP12.13□□□□□ -0.47
VAT1-204ENST00000587147 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 PYGO2Q9BRQ0 406 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 NIPSNAP3BQ9BS92 247 aa12.13□□□□□ -0.47
VAT1-204ENST00000587147 C7orf71A4D174 169 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 TCTAP57738 103 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 NANOS2P60321 138 aaKnown RBP12.12□□□□□ -0.47
VAT1-204ENST00000587147 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
VAT1-204ENST00000587147 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 TMEM263Q8WUH6 116 aaKnown RBP12.12□□□□□ -0.47
VAT1-204ENST00000587147 VGLL1Q99990 258 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 DKK2Q9UBU2 259 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
VAT1-204ENST00000587147 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 K7EQM0 130 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 EIF3GO75821 320 aaKnown RBP eCLIP12.11□□□□□ -0.47
VAT1-204ENST00000587147 GPX1P07203 203 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 PMS2P11Q13670 270 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
VAT1-204ENST00000587147 DYNC2H1Q8NCM8 4307 aaKnown RBP12.11□□□□□ -0.47
VAT1-204ENST00000587147 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
VAT1-204ENST00000587147 RAB5CP51148 216 aa12.1□□□□□ -0.47
VAT1-204ENST00000587147 CCDC28AQ8IWP9 274 aa12.1□□□□□ -0.47
VAT1-204ENST00000587147 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
VAT1-204ENST00000587147 TCEAL7Q9BRU2 100 aa12.1□□□□□ -0.47
VAT1-204ENST00000587147 YTHDF2Q9Y5A9 579 aaKnown RBP12.1□□□□□ -0.47
VAT1-204ENST00000587147 ZNF705GA8MUZ8 300 aaPredicted RBP12.09□□□□□ -0.47
VAT1-204ENST00000587147 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
VAT1-204ENST00000587147 PRB4P10163 310 aaPredicted RBP12.09□□□□□ -0.47
VAT1-204ENST00000587147 FHITP49789 147 aa12.09□□□□□ -0.47
VAT1-204ENST00000587147 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
VAT1-204ENST00000587147 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
VAT1-204ENST00000587147 SLC51BQ86UW2 128 aa12.09□□□□□ -0.47
VAT1-204ENST00000587147 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
VAT1-204ENST00000587147 CELA1Q9UNI1 258 aa12.09□□□□□ -0.47
VAT1-204ENST00000587147 LYSTQ99698 3801 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 hCG_2014768A0A024R1R8 64 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 TCRAP04437 139 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 FAM222AQ5U5X8 452 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 GOLT1AQ6ZVE7 132 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 IQCF2Q8IXL9 164 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 ZNF680Q8NEM1 530 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 C2CD4CQ8TF44 421 aa12.08□□□□□ -0.48
VAT1-204ENST00000587147 KMT2CQ8NEZ4 4911 aaKnown RBP12.08□□□□□ -0.48
VAT1-204ENST00000587147 PLAC8L1A1L4L8 177 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 PPT1P50897 306 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 EMP1P54849 157 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 SUMO1P63165 101 aaKnown RBP12.07□□□□□ -0.48
VAT1-204ENST00000587147 Q6AWC8 147 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 Q6ZTC4 211 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 CYB561D1Q8N8Q1 229 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
VAT1-204ENST00000587147 TIMM8BQ9Y5J9 83 aaPredicted RBP12.07□□□□□ -0.48
VAT1-204ENST00000587147 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
VAT1-204ENST00000587147 CD300CQ08708 224 aa12.06□□□□□ -0.48
VAT1-204ENST00000587147 BTN1A1Q13410 526 aa12.06□□□□□ -0.48
VAT1-204ENST00000587147 ZFP69Q49AA0 526 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms