RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ATP6V0CP27449 155 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 SPINK13Q1W4C9 94 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 EXOC3-AS1Q8N2X6 119 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 OR10G4Q8NGN3 311 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 OR10G9Q8NGN4 311 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 OR10G7Q8NGN6 311 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 OR10J6PQ8NGY7 276 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 RNF141Q8WVD5 230 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 SH3BGRL3Q9H299 93 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
GGA3-219ENST00000584550 TRAV12-2A0A075B6T6 113 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 NBDYA0A0U1RRE5 68 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 M0R3E3 92 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 TAS2R45P59539 299 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
GGA3-219ENST00000584550 ICAM4Q14773 271 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 KHDC3LQ587J8 217 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 TMEM88Q6PEY1 159 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 AMTNQ6UX39 209 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 BAP18Q8IXM2 172 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 ZNF503Q96F45 646 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 ATG101Q9BSB4 218 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 TMEM208Q9BTX3 173 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
GGA3-219ENST00000584550 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
GGA3-219ENST00000584550 BOLA2-SMG1P6H3BVE0 249 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 J3KRW8 73 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 ZNF253O75346 499 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 RANP62826 216 aaKnown RBP7.19□□□□□ -1.26
GGA3-219ENST00000584550 ERCC8Q13216 396 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 PDE6HQ13956 83 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 FAM222AQ5U5X8 452 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 OR2G3Q8NGZ4 309 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 GNPNAT1Q96EK6 184 aaPredicted RBP7.19□□□□□ -1.26
GGA3-219ENST00000584550 PHYHIPLQ96FC7 376 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 NIPSNAP3BQ9BS92 247 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 PSMG3Q9BT73 122 aaPredicted RBP7.19□□□□□ -1.26
GGA3-219ENST00000584550 GOLT1BQ9Y3E0 138 aa7.19□□□□□ -1.26
GGA3-219ENST00000584550 FAT1Q14517 4588 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 A8MTW9 85 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 TAAR5O14804 337 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 ATP6V1G1O75348 118 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 INSP01308 110 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 CDC34P49427 236 aaPredicted RBP7.18□□□□□ -1.26
GGA3-219ENST00000584550 C1orf158Q8N1D5 194 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 IGF2BP2-AS1Q96M15 143 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 DKK2Q9UBU2 259 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 PRELID1Q9Y255 219 aa7.18□□□□□ -1.26
GGA3-219ENST00000584550 IGKV2-40A0A087WW87 121 aaPredicted RBP7.17□□□□□ -1.26
GGA3-219ENST00000584550 IGKV2D-40P01614 121 aaPredicted RBP7.17□□□□□ -1.26
GGA3-219ENST00000584550 MBP02144 154 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 PRM2P04554 102 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 SERF2P84101 59 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 ZNF705AQ6ZN79 300 aaPredicted RBP7.17□□□□□ -1.26
GGA3-219ENST00000584550 PQLC2Q6ZP29 291 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 IQCF2Q8IXL9 164 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
GGA3-219ENST00000584550 HYLS1Q96M11 299 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 LINC01587Q99440 93 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 ARPC5LQ9BPX5 153 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 ACTR3CQ9C0K3 210 aaPredicted RBP7.17□□□□□ -1.26
GGA3-219ENST00000584550 Q9H3A6 140 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 CYTL1Q9NRR1 136 aa7.17□□□□□ -1.26
GGA3-219ENST00000584550 ZNF705GA8MUZ8 300 aaPredicted RBP7.16□□□□□ -1.26
GGA3-219ENST00000584550 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 CRXO43186 299 aaPredicted RBP7.16□□□□□ -1.26
GGA3-219ENST00000584550 HBE1P02100 147 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 ARL14EPLP0DKL9 152 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 CT45A10P0DMU9 189 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 HTN1P15515 57 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 TSPOP30536 169 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 FUSP35637 526 aaKnown RBP eCLIP7.16□□□□□ -1.26
GGA3-219ENST00000584550 CSN1S1P47710 185 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 AKR1C8PQ5T2L2 129 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 Q5VSD8 79 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 ZNRF2Q8NHG8 242 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 ST6GAL2Q96JF0 529 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 ZNF471Q9BX82 626 aaPredicted RBP7.16□□□□□ -1.26
GGA3-219ENST00000584550 RPH3ALQ9UNE2 315 aa7.16□□□□□ -1.26
GGA3-219ENST00000584550 A0A0D9SG52 128 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 LOC102723971A0A1B0GUV8 181 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 KANTRA0A1W2PQU2 76 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 TMEM189A5PLL7 270 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 PGPA6NDG6 321 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 SMIM9A6NGZ8 99 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 HMSDA8MTL9 139 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 GCHFRP30047 84 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 LEPP41159 167 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 CDKN1BP46527 198 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 FAM3BP58499 235 aaPredicted RBP7.15□□□□□ -1.26
GGA3-219ENST00000584550 ZNF345Q14585 488 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 RRN3P1Q2M238 152 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms