RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SUN5Q8TC36 379 aa9.19□□□□□ -0.94
CDK5RAP3-203ENST00000577442 MAP1LC3BQ9GZQ8 125 aa9.19□□□□□ -0.94
CDK5RAP3-203ENST00000577442 TENM2Q9NT68 2774 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 TRBV7-9A0A0J9YWB2 115 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 TEX48A0A1B0GUV7 120 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 DEFB4AO15263 64 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 NMBP08949 121 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ERCC8Q13216 396 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 LGALSLQ3ZCW2 172 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 AGPAT4-IT1Q9H0P7 198 aa9.18□□□□□ -0.94
CDK5RAP3-203ENST00000577442 SERTM2A0A1B0GWG4 89 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 H7BYZ3 331 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 RBMY1A1P0DJD3 496 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 RBMY1CP0DJD4 496 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 CRISP2P16562 243 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ZNF138P52744 262 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 RBMY1FQ15415 496 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 CASC10Q5T4H9 136 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ZFAND6Q6FIF0 208 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 SLC51BQ86UW2 128 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 TMED6Q8WW62 240 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 LINC01587Q99440 93 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 VGLL1Q99990 258 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 NKX6-2Q9C056 277 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 RPH3ALQ9UNE2 315 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
CDK5RAP3-203ENST00000577442 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 A0A1B0GVG6 124 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 C7orf71A4D174 169 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 K7EQM0 130 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 RAB5CP51148 216 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 TAS2R60P59551 318 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 PMS2P11Q13670 270 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 FAM213BQ8TBF2 198 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ZNF492Q9P255 531 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
CDK5RAP3-203ENST00000577442 DYNC2H1Q8NCM8 4307 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 KLLNB2CW77 178 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 J3KRW8 73 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 GPX1P07203 203 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 FGF8P55075 233 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 GOLT1AQ6ZVE7 132 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
CDK5RAP3-203ENST00000577442 FBLL1A6NHQ2 334 aaKnown RBP9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 SPART-AS1P0CW21 52 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 FHITP49789 147 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 EMP1P54849 157 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 NANOS2P60321 138 aaKnown RBP9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 SUMO1P63165 101 aaKnown RBP9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 CD300CQ08708 224 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 ZNF493Q6ZR52 646 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 CCDC28AQ8IWP9 274 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 Q8TAT8 98 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 C11orf94C9JXX5 98 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TEX46H3BTG2 121 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 IFNA7P01567 189 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TCRAP04437 139 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 PPT1P50897 306 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 UBE2G2P60604 165 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 GNG5P63218 68 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 CYB561D1Q8N8Q1 229 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TMEM263Q8WUH6 116 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-203ENST00000577442 FAM74A7A6NL05 159 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 HTN1P15515 57 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 PHLDA1Q8WV24 401 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 DKK2Q9UBU2 259 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 EPDR1Q9UM22 224 aa9.12□□□□□ -0.95
CDK5RAP3-203ENST00000577442 CELA1Q9UNI1 258 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms