RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
COMMD4-214ENST00000566230 YTHDF2Q9Y5A9 579 aaKnown RBP9.43□□□□□ -0.9
COMMD4-214ENST00000566230 H3BTX0 84 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 SLC17A3O00476 420 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 ARPC5O15511 151 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 NDUFB4O95168 129 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 ATP6V0CP27449 155 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 FAM3BP58499 235 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-214ENST00000566230 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 AMTNQ6UX39 209 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 BLNKQ8WV28 456 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 SLC35B3Q9H1N7 401 aa9.42□□□□□ -0.9
COMMD4-214ENST00000566230 A0A0D9SG52 128 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 OR7C2O60412 319 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-214ENST00000566230 RPL7L1Q6DKI1 246 aaKnown RBP9.41□□□□□ -0.9
COMMD4-214ENST00000566230 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
COMMD4-214ENST00000566230 DAD1P61803 113 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 ZNF345Q14585 488 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 C6orf223Q8N319 242 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 ZNF503Q96F45 646 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
COMMD4-214ENST00000566230 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.91
COMMD4-214ENST00000566230 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 SMLR1H3BR10 107 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 HBE1P02100 147 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 OR10J4P0C629 311 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 TSPOP30536 169 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 CDKN1BP46527 198 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 RAB2AP61019 212 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 ICAM4Q14773 271 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 C15orf53Q8NAA6 179 aa9.39□□□□□ -0.91
COMMD4-214ENST00000566230 BOLA2-SMG1P6H3BVE0 249 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
COMMD4-214ENST00000566230 PRM2P04554 102 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 CSN1S1P47710 185 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 CDC34P49427 236 aaPredicted RBP9.38□□□□□ -0.91
COMMD4-214ENST00000566230 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
COMMD4-214ENST00000566230 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 FAM122CQ6P4D5 195 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 RXFP4Q8TDU9 374 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 ARPC5LQ9BPX5 153 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 ACTR3CQ9C0K3 210 aaPredicted RBP9.38□□□□□ -0.91
COMMD4-214ENST00000566230 CYTL1Q9NRR1 136 aa9.38□□□□□ -0.91
COMMD4-214ENST00000566230 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 M0R2Z0 102 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 M0R3E3 92 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 INSP01308 110 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
COMMD4-214ENST00000566230 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 TMEM256Q8N2U0 113 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 ST6GAL2Q96JF0 529 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 TMEM208Q9BTX3 173 aa9.37□□□□□ -0.91
COMMD4-214ENST00000566230 KANTRA0A1W2PQU2 76 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 EIF5AP63241 154 aaKnown RBP9.36□□□□□ -0.91
COMMD4-214ENST00000566230 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 TCTE3Q8IZS6 198 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 Q9H3A6 140 aa9.36□□□□□ -0.91
COMMD4-214ENST00000566230 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 PGPA6NDG6 321 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 ZNF705GA8MUZ8 300 aaPredicted RBP9.35□□□□□ -0.91
COMMD4-214ENST00000566230 CXorf1O96002 111 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
COMMD4-214ENST00000566230 NMBP08949 121 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 LEPP41159 167 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 AKR1C8PQ5T2L2 129 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 LINC01587Q99440 93 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 OTORQ9NRC9 128 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
COMMD4-214ENST00000566230 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 TRBV7-9A0A0J9YWB2 115 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
COMMD4-214ENST00000566230 NUDT3O95989 172 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 SEC11BP0C7V7 166 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms