RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TRAV12-3A0A0B4J271 114 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 HTN3P15516 51 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 RAB2AP61019 212 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 SERF2P84101 59 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 LGALS9CQ6DKI2 356 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 ZNF493Q6ZR52 646 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 CMTM2Q8TAZ6 248 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 RXFP4Q8TDU9 374 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 PSMG3Q9BT73 122 aaPredicted RBP9.77□□□□□ -0.85
CNOT1-206ENST00000564557 Q9H3A6 140 aa9.77□□□□□ -0.85
CNOT1-206ENST00000564557 DYNC2H1Q8NCM8 4307 aaKnown RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 PRM2P04554 102 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 SLC25A5P05141 298 aaKnown RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 GPX1P07203 203 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 ATP6V0CP27449 155 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 CDC34P49427 236 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 C9orf47Q6ZRZ4 202 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 HYLS1Q96M11 299 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 NDUFAF3Q9BU61 184 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 AGPAT4-IT1Q9H0P7 198 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 TNFSF18Q9UNG2 199 aa9.76□□□□□ -0.85
CNOT1-206ENST00000564557 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-206ENST00000564557 SNURFLB1AK76 121 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 HMGB3O15347 200 aaKnown RBP9.75□□□□□ -0.85
CNOT1-206ENST00000564557 EIF3GO75821 320 aaKnown RBP eCLIP9.75□□□□□ -0.85
CNOT1-206ENST00000564557 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 AZU1P20160 251 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 OR2G3Q8NGZ4 309 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
CNOT1-206ENST00000564557 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
CNOT1-206ENST00000564557 C7orf71A4D174 169 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 PGPA6NDG6 321 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 TAAR5O14804 337 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 ARPC5O15511 151 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 RNASE4P34096 147 aaKnown RBP9.74□□□□□ -0.85
CNOT1-206ENST00000564557 ZNF138P52744 262 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
CNOT1-206ENST00000564557 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 VGLL1Q99990 258 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 ACTR3CQ9C0K3 210 aaPredicted RBP9.74□□□□□ -0.85
CNOT1-206ENST00000564557 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 RYR3Q15413 4870 aa9.74□□□□□ -0.85
CNOT1-206ENST00000564557 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 RNF222A6NCQ9 220 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 NMBP08949 121 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 IQCF2Q8IXL9 164 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 FAM210BQ96KR6 192 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
CNOT1-206ENST00000564557 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
CNOT1-206ENST00000564557 DIRC3C9JPN6 131 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 RGS13O14921 159 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 RAB24Q969Q5 203 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 LYSTQ99698 3801 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 SH3BGRL3Q9H299 93 aa9.72□□□□□ -0.85
CNOT1-206ENST00000564557 SACSQ9NZJ4 4579 aa9.71□□□□□ -0.85
CNOT1-206ENST00000564557 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 CBY3A6NI87 242 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 KLLNB2CW77 178 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 CXorf1O96002 111 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 ATP5G1P05496 136 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 STAG3L2P0CL84 134 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 STAG3L3P0CL85 134 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 P0DMU3 169 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 FAM231AP0DMU4 169 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 FAM231CP0DMU5 169 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 CRISP2P16562 243 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 ATP5G3P48201 142 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 CD300CQ08708 224 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 BTN1A1Q13410 526 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 AKR1C8PQ5T2L2 129 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 ZNF680Q8NEM1 530 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.86
CNOT1-206ENST00000564557 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.86
CNOT1-206ENST00000564557 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.86
CNOT1-206ENST00000564557 F5H768 121 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 SMLR1H3BR10 107 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 K7EQM0 130 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 GCHFRP30047 84 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 EIF4E3Q8N5X7 224 aaKnown RBP9.7□□□□□ -0.86
CNOT1-206ENST00000564557 Q8TAT8 98 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 FAM19A4Q96LR4 140 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 ARPC5LQ9BPX5 153 aa9.7□□□□□ -0.86
CNOT1-206ENST00000564557 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
CNOT1-206ENST00000564557 GOLT1AQ6ZVE7 132 aa9.69□□□□□ -0.86
CNOT1-206ENST00000564557 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
CNOT1-206ENST00000564557 ARL6IP6Q8N6S5 226 aa9.69□□□□□ -0.86
CNOT1-206ENST00000564557 LENEPQ9Y5L5 61 aa9.69□□□□□ -0.86
CNOT1-206ENST00000564557 RYR2Q92736 4967 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms