RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
CLK3-214ENST00000564096 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 PPP1R14DQ9NXH3 145 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 LY96Q9Y6Y9 160 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 TENM1Q9UKZ4 2725 aa9.56□□□□□ -0.88
CLK3-214ENST00000564096 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 TRAV34A0A0B4J273 112 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 A0A0J9YX75 114 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 PRAC2D3DTV9 90 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 CT45A10P0DMU9 189 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 HLA-DRB4P13762 266 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 ADCYAP1P18509 176 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 ZNF138P52744 262 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 IGF2BP2-AS1Q96M15 143 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 LINC00477Q96M19 166 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 ODF3Q96PU9 254 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 CARHSP1Q9Y2V2 147 aaKnown RBP9.55□□□□□ -0.88
CLK3-214ENST00000564096 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 HLA-DRB4X5D2U9 266 aa9.55□□□□□ -0.88
CLK3-214ENST00000564096 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 F6UB75 175 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 S100A1P23297 94 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 TMEM241Q24JQ0 296 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 ACTL10Q5JWF8 245 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 STHQ8IWL8 128 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 SVBPQ8N300 66 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 Q8TAT8 98 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 LINC00479Q96M42 142 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 VGLL1Q99990 258 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
CLK3-214ENST00000564096 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 MGST1P10620 155 aaKnown RBP9.53□□□□□ -0.88
CLK3-214ENST00000564096 TSPOP30536 169 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 LEPP41159 167 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 ERCC8Q13216 396 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 ADIRFQ15847 76 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 TMEM183AQ8IXX5 376 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 TVP23CQ96ET8 276 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 ZNF492Q9P255 531 aa9.53□□□□□ -0.88
CLK3-214ENST00000564096 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 KNCNA6PVL3 124 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 M0R036 132 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 SNAPINO95295 136 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 APOC3P02656 99 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 CD7P09564 240 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 PRB4P10163 310 aaPredicted RBP9.52□□□□□ -0.89
CLK3-214ENST00000564096 C10orf91Q5T1B1 145 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 LINC01551Q86U37 167 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 APRG1Q8IVJ8 170 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 PRR25Q96S07 402 aa9.52□□□□□ -0.89
CLK3-214ENST00000564096 ANK2Q01484 3957 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 H3BMM0 161 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 ZNF705DP0CH99 300 aaPredicted RBP9.51□□□□□ -0.89
CLK3-214ENST00000564096 ZNF705BP0CI00 300 aaPredicted RBP9.51□□□□□ -0.89
CLK3-214ENST00000564096 DEFB1P60022 68 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 NUTF2P61970 127 aaKnown RBP9.51□□□□□ -0.89
CLK3-214ENST00000564096 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 GDF5OSQ5U4N7 250 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
CLK3-214ENST00000564096 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 AMBPP02760 352 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 CRISP2P16562 243 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
CLK3-214ENST00000564096 RHEBQ15382 184 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
CLK3-214ENST00000564096 PGPEP1LA6NFU8 196 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 A8MTW9 85 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 B4DEV8 164 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 CDKN1BP46527 198 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 COX8CQ7Z4L0 72 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
CLK3-214ENST00000564096 C15orf54Q8N8G6 183 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
CLK3-214ENST00000564096 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 C19orf73Q9NVV2 129 aa9.49□□□□□ -0.89
CLK3-214ENST00000564096 GCGP01275 180 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 GPX1P07203 203 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 ZNF124Q15973 351 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 MORN3Q6PF18 240 aaPredicted RBP9.48□□□□□ -0.89
CLK3-214ENST00000564096 OCC1Q8TAD7 63 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 ISOC2Q96AB3 205 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 ASCL2Q99929 193 aa9.48□□□□□ -0.89
CLK3-214ENST00000564096 WFDC10AQ9H1F0 79 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms