RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 PRNTQ86SH4 94 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 Q86TA4 180 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 SVBPQ8N300 66 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 WFDC9Q8NEX5 89 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
SMG1-208ENST00000563448 K7EN84 100 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 LTAP01374 205 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 CD33P20138 364 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
SMG1-208ENST00000563448 C9orf66Q5T8R8 295 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 C9orf47Q6ZRZ4 202 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 LINC01551Q86U37 167 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 AGPAT4-IT1Q9H0P7 198 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 LY96Q9Y6Y9 160 aa7.58□□□□□ -1.2
SMG1-208ENST00000563448 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 M0R036 132 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
SMG1-208ENST00000563448 ADIRFQ15847 76 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 BAGE2Q86Y30 109 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 LINC00469Q8N7U9 141 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 OR8A1Q8NGG7 326 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 MDFIQ99750 246 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 MLST8Q9BVC4 326 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 SNAPINO95295 136 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 INSL3P51460 131 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 DEFB131AP59861 70 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 Q8TAT8 98 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 C8orf49Q96NF6 230 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 MAP6D1Q9H9H5 199 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 STAB1Q9NY15 2570 aa7.57□□□□□ -1.2
SMG1-208ENST00000563448 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
SMG1-208ENST00000563448 NPIPB6E9PJ23 425 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 GCGP01275 180 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 HIST1H1AQ02539 215 aaPredicted RBP7.56□□□□□ -1.2
SMG1-208ENST00000563448 OR5I1Q13606 314 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 TMEM183AQ8IXX5 376 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 OR10J6PQ8NGY7 276 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 ISOC2Q96AB3 205 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 PRR25Q96S07 402 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 ZNF492Q9P255 531 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 VWFP04275 2813 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 A0A0J9YX75 114 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 C7orf77A4D0Y5 90 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
SMG1-208ENST00000563448 IGLL1P15814 213 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 ZNF124Q15973 351 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 ODF3L2Q3SX64 289 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 TMEM78Q5T7P6 136 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 LINC00477Q96M19 166 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 MCRIP2Q9BUT9 160 aaKnown RBP7.56□□□□□ -1.2
SMG1-208ENST00000563448 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
SMG1-208ENST00000563448 PPP1R14DQ9NXH3 145 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
SMG1-208ENST00000563448 TRRAPQ9Y4A5 3859 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 CT45A10P0DMU9 189 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 ZNF138P52744 262 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 ZC2HC1AQ96GY0 325 aa7.55□□□□□ -1.2
SMG1-208ENST00000563448 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 B4DEV8 164 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 SAPCD1Q5SSQ6 148 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 EBLN2Q6P2I7 272 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 LINC00322Q6ZN03 302 aaPredicted RBP7.54□□□□□ -1.2
SMG1-208ENST00000563448 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 C12orf57Q99622 126 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 RPS10P5Q9NQ39 176 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 S100A8P05109 93 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 CD7P09564 240 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 RHEBQ15382 184 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 RNF212Q495C1 297 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
SMG1-208ENST00000563448 WIPF1O43516 503 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 CRIP1P50238 77 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
SMG1-208ENST00000563448 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
SMG1-208ENST00000563448 C19orf73Q9NVV2 129 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 LENEPQ9Y5L5 61 aa7.53□□□□□ -1.2
SMG1-208ENST00000563448 C19orf71A6NCJ1 209 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 OR11H12B2RN74 326 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.2
SMG1-208ENST00000563448 SMIM6P0DI80 62 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 HLA-DRB4P13762 266 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.2
SMG1-208ENST00000563448 ACTL10Q5JWF8 245 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 OR4B1Q8NGF8 309 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 NDFIP1Q9BT67 221 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 HLA-DRB4X5D2U9 266 aa7.52□□□□□ -1.2
SMG1-208ENST00000563448 A0A087WWC5 75 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 A8MTW9 85 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms