RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304		M0R3E3	92 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	NDUFB4	O95168	129 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	CT45A10	P0DMU9	189 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	HTN1	P15515	57 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	PVALB	P20472	110 aa	Predicted RBP	5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	S100A11	P31949	105 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	RPL29	P47914	159 aa	Known RBP	5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	H2BFS	P57053	126 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	TAS2R60	P59551	318 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	KRTAP10-2	P60368	255 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	LRRC37A5P	Q49AS3	106 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304		Q6ZR54	194 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304		Q6ZRG5	221 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	LINC00299	Q6ZSB3	139 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	STX12	Q86Y82	276 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	UBE2DNL	Q8IWF7	75 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	THAP6	Q8TBB0	222 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	ENKUR	Q8TC29	256 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	FAM210B	Q96KR6	192 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	SLC25A2	Q9BXI2	301 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	PPP1R14D	Q9NXH3	145 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	LRP1B	Q9NZR2	4599 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	RYR1	P21817	5038 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	MUC4	Q99102	2169 aa		5.19	□□□□□ -1.58
ZEB1-223	ENST00000561304	TRBV19	A0A075B6N1	114 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	ERCC8	Q13216	396 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	RAB31	Q13636	194 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	MIR17HG	Q75NE6	70 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	S100A7A	Q86SG5	101 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	TMEM256	Q8N2U0	113 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	EXOC3-AS1	Q8N2X6	119 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	OR5C1	Q8NGR4	320 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	OR1L4	Q8NGR5	311 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	TMEM263	Q8WUH6	116 aa	Known RBP	5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	C16orf74	Q96GX8	76 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	FAM167A-AS1	Q96KT0	104 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	PFDN5	Q99471	154 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	NMES1	Q9C002	83 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	PTTG2	Q9NZH5	202 aa		5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	APOB	P04114	4563 aa	Known RBP	5.18	□□□□□ -1.58
ZEB1-223	ENST00000561304	TRAV12-3	A0A0B4J271	114 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304		F5H768	121 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304		H7BYZ3	331 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	HBG1	P69891	147 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	HBG2	P69892	147 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	CLINT1	Q14677	625 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	LGALS9B	Q3B8N2	356 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	PRR9	Q5T870	116 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304		Q6ZQT7	251 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	LINC00612	Q8N6U2	182 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	OR10J6P	Q8NGY7	276 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	BLNK	Q8WV28	456 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	FAM19A4	Q96LR4	140 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	KRTAP3-1	Q9BYR8	98 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	NOP10	Q9NPE3	64 aa	Known RBP	5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	TMEM14C	Q9P0S9	112 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	RNF24	Q9Y225	148 aa		5.17	□□□□□ -1.58
ZEB1-223	ENST00000561304	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	PRSS29P	A6NIE9	313 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304		E5RGE8	158 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	INMT-MINDY4	F8WBC2	141 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ZNF253	O75346	499 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	EIF3G	O75821	320 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	NUDT3	O95989	172 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	IGKV2D-40	P01614	121 aa	Predicted RBP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	HIST1H1E	P10412	219 aa	Known RBP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	CD300C	Q08708	224 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	BTN1A1	Q13410	526 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GUK1	Q16774	197 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ATP6V1F	Q16864	119 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	RNF212	Q495C1	297 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	LINC00336	Q6ZUF6	198 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	C15orf53	Q8NAA6	179 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	FXYD5	Q96DB9	178 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ZNF503	Q96F45	646 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	PHYHIPL	Q96FC7	376 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	C8orf49	Q96NF6	230 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ODF3	Q96PU9	254 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	C20orf144	Q9BQM9	153 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	MARVELD1	Q9BSK0	173 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	WDR61	Q9GZS3	305 aa	Known RBP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GAGE12B	A1L429	117 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	CBY3	A6NI87	242 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	KLLN	B2CW77	178 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	PRAF2	O60831	178 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	MPDU1	O75352	247 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GAGE7	O76087	117 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ATP5G1	P05496	136 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	OR10J4	P0C629	311 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GAGE12F	P0CL80	117 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GAGE12G	P0CL81	117 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	GAGE12I	P0CL82	117 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	LEP	P41159	167 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ATP5G3	P48201	142 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	PDE6H	Q13956	83 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ICAM4	Q14773	271 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	ZNF493	Q6ZR52	646 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304		Q6ZTI0	123 aa		5.16	□□□□□ -1.58
ZEB1-223	ENST00000561304	C11orf72	Q8NBR9	251 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms