RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 S100A11P31949 105 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 SULT1A1P50225 295 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 BTN1A1Q13410 526 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 ANXA2RQ3ZCQ2 193 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 EIF4E3Q8N5X7 224 aaKnown RBP11.97□□□□□ -0.49
CRTC3-208ENST00000560098 CHAC2Q8WUX2 184 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 C2orf50Q96LR7 162 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
CRTC3-208ENST00000560098 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
CRTC3-208ENST00000560098 TRAV6A0A075B6T7 132 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 LYRM1O43325 122 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 TCRBP04435 133 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
CRTC3-208ENST00000560098 LINC00315P59091 139 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 CD300CQ08708 224 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 PDE6HQ13956 83 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 SEC22CQ9BRL7 303 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
CRTC3-208ENST00000560098 SPINK4O60575 86 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 PYYP10082 97 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 FGF7P21781 194 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
CRTC3-208ENST00000560098 S100A10P60903 97 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 HBG1P69891 147 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 HBG2P69892 147 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 STX12Q86Y82 276 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
CRTC3-208ENST00000560098 IGSF23A1L1A6 192 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 MPDU1O75352 247 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 TCL1AP56279 114 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 NUDT15Q9NV35 164 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 KLF12Q9Y4X4 402 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 SIVA1O15304 175 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 GPX1P07203 203 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 CRISP2P16562 243 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 ATP6V1FQ16864 119 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
CRTC3-208ENST00000560098 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
CRTC3-208ENST00000560098 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
CRTC3-208ENST00000560098 NMBP08949 121 aa11.93□□□□□ -0.5
CRTC3-208ENST00000560098 IL15RAQ13261 267 aa11.93□□□□□ -0.5
CRTC3-208ENST00000560098 RAB32Q13637 225 aa11.93□□□□□ -0.5
CRTC3-208ENST00000560098 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
CRTC3-208ENST00000560098 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
CRTC3-208ENST00000560098 IGKV2-40A0A087WW87 121 aaPredicted RBP11.92□□□□□ -0.5
CRTC3-208ENST00000560098 RGS13O14921 159 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 PAX4O43316 350 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 IGKV2D-40P01614 121 aaPredicted RBP11.92□□□□□ -0.5
CRTC3-208ENST00000560098 ICAM4Q14773 271 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 NPCDR1Q9BY65 106 aa11.92□□□□□ -0.5
CRTC3-208ENST00000560098 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
CRTC3-208ENST00000560098 NXPH4O95158 308 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 PRR9Q5T870 116 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 VGLL1Q99990 258 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
CRTC3-208ENST00000560098 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 H2AFB2P0C5Z0 115 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 SLAQ13239 276 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 MRPL16Q9NX20 251 aaKnown RBP11.9□□□□□ -0.5
CRTC3-208ENST00000560098 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
CRTC3-208ENST00000560098 Q6ZQT7 251 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
CRTC3-208ENST00000560098 EREGO14944 169 aa11.88□□□□□ -0.51
CRTC3-208ENST00000560098 NBEAP1P0C6P0 100 aa11.88□□□□□ -0.51
CRTC3-208ENST00000560098 CRYBA4P53673 196 aa11.88□□□□□ -0.51
CRTC3-208ENST00000560098 OR51M1Q9H341 326 aa11.88□□□□□ -0.51
CRTC3-208ENST00000560098 ZNF138P52744 262 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 NHLH2Q02577 135 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 FHL2Q14192 279 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
CRTC3-208ENST00000560098 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 THAP6Q8TBB0 222 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 C8orf49Q96NF6 230 aa11.87□□□□□ -0.51
CRTC3-208ENST00000560098 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 PRAF2O60831 178 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 OR5C1Q8NGR4 320 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 Q8TAT8 98 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 FAM240BA0A1B0GVZ2 78 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 OR10J4P0C629 311 aa11.86□□□□□ -0.51
CRTC3-208ENST00000560098 FUSP35637 526 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms