RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 HOXA5P20719 270 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 CDKN1BP46527 198 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 CAMLGP49069 296 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 C10orf113Q5VZT2 155 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 MIC13Q5XKP0 118 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 LCN15Q6UWW0 184 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 NRARPQ7Z6K4 114 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 TMEM256Q8N2U0 113 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 TMEM252Q8N6L7 170 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 ZNF431Q8TF32 576 aaPredicted RBP3.86□□□□□ -1.79
SMAD3-209ENST00000558894 TMEM208Q9BTX3 173 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 DNAJC4Q9NNZ3 241 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 GSN-AS1Q9NRJ2 163 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 LYRM2Q9NU23 88 aaPredicted RBP3.86□□□□□ -1.79
SMAD3-209ENST00000558894 MGAT4CQ9UBM8 478 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 LINC00588Q9Y4M8 146 aa3.86□□□□□ -1.79
SMAD3-209ENST00000558894 NBDYA0A0U1RRE5 68 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 H0YIZ8 118 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 H7BYZ3 331 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 NDUFS6O75380 124 aaKnown RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 ZNF324O75467 553 aaPredicted RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 S100A7P31151 101 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 RPL29P47914 159 aaKnown RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 INPP1P49441 399 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 SULT1A1P50225 295 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 FAM3BP58499 235 aaPredicted RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 RHOBP62745 196 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 IFITM3Q01628 133 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 RAB32Q13637 225 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 GCSAMLQ5JQS6 135 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 ZNF493Q6ZR52 646 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 ZNF575Q86XF7 245 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 BPIFA4PQ86YQ2 179 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C12orf45Q8N5I9 185 aaPredicted RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C15orf53Q8NAA6 179 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C11orf72Q8NBR9 251 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 TMEM263Q8WUH6 116 aaKnown RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 RNF141Q8WVD5 230 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C16orf74Q96GX8 76 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 FAM167A-AS1Q96KT0 104 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C2orf50Q96LR7 162 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 ODF3Q96PU9 254 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 LINC01587Q99440 93 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C20orf144Q9BQM9 153 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 SLC50A1Q9BRV3 221 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 C2orf88Q9BSF0 95 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 TMEM14CQ9P0S9 112 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 LSM5Q9Y4Y9 91 aaKnown RBP3.85□□□□□ -1.79
SMAD3-209ENST00000558894 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
SMAD3-209ENST00000558894 TRBV19A0A075B6N1 114 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 KLLNB2CW77 178 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 F5H768 121 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 M0R3E3 92 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 COX7A2P2O60397 106 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 ZNF253O75346 499 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 ATP5G1P05496 136 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 LINC00614P0C842 121 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 PYYP10082 97 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 ATP5G3P48201 142 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 CAV2P51636 162 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 AKR1D1P51857 326 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 NHLH2Q02577 135 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 ASAH1Q13510 395 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 GUK1Q16774 197 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 PRR9Q5T870 116 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 C1orf134Q5TEV5 83 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 TEX261Q6UWH6 196 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 Q6ZQT7 251 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 COMMD7Q86VX2 200 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 UBE2DNLQ8IWF7 75 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 C18orf15Q96N68 181 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 LINC00467Q9BRT7 94 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 NOP10Q9NPE3 64 aaKnown RBP3.84□□□□□ -1.79
SMAD3-209ENST00000558894 SLC39A9Q9NUM3 307 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 UQCC1Q9NVA1 299 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.79
SMAD3-209ENST00000558894 PXMP4Q9Y6I8 212 aa3.84□□□□□ -1.79
SMAD3-209ENST00000558894 FAT1Q14517 4588 aa3.84□□□□□ -1.8
SMAD3-209ENST00000558894 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 TRAV26-1A0A087WT03 109 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 TRAV12-3A0A0B4J271 114 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 UBE2L5PA0A1B0GUS4 154 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 C5orf51A6NDU8 294 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 H3BNG1 76 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 NUDT3O95989 172 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 MBP02144 154 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 HTN1P15515 57 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 CRISP2P16562 243 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 S100A11P31949 105 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 RPL35P42766 123 aaKnown RBP3.83□□□□□ -1.8
SMAD3-209ENST00000558894 SMCPP49901 116 aaPredicted RBP3.83□□□□□ -1.8
SMAD3-209ENST00000558894 VAMP2P63027 116 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 DAZ2Q13117 558 aaKnown RBP3.83□□□□□ -1.8
SMAD3-209ENST00000558894 ERCC8Q13216 396 aa3.83□□□□□ -1.8
SMAD3-209ENST00000558894 BTN1A1Q13410 526 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms