RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 DEFB130BP0DP73 79 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 DEFB130AP0DP74 79 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 LEPP41159 167 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 RANP62826 216 aaKnown RBP5.72□□□□□ -1.49
VTI1B-206ENST00000556461 BTN1A1Q13410 526 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 TMEM88Q6PEY1 159 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 NDUFAF3Q9BU61 184 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 NOP10Q9NPE3 64 aaKnown RBP5.72□□□□□ -1.49
VTI1B-206ENST00000556461 C7orf71A4D174 169 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 RNF222A6NCQ9 220 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 KLLNB2CW77 178 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 HMGB3O15347 200 aaKnown RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF324O75467 553 aaPredicted RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 GIPP09681 153 aaPredicted RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 CRISP2P16562 243 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 RNASE4P34096 147 aaKnown RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 UBE2L3P68036 154 aaKnown RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 C9orf47Q6ZRZ4 202 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 ZFAND2AQ8N6M9 145 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 HSD17B11Q8NBQ5 300 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 Q8TAT8 98 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 TMEM263Q8WUH6 116 aaKnown RBP5.71□□□□□ -1.5
VTI1B-206ENST00000556461 C16orf74Q96GX8 76 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 AQP10Q96PS8 301 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 C20orf144Q9BQM9 153 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 Q9H3A6 140 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 AAMDCQ9H7C9 122 aa5.71□□□□□ -1.5
VTI1B-206ENST00000556461 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
VTI1B-206ENST00000556461 M6PRP20645 277 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 ATP6V0CP27449 155 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 RGS21Q2M5E4 152 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 ACOT6Q3I5F7 207 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF493Q6ZR52 646 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 LINC00612Q8N6U2 182 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 SH3BGRL3Q9H299 93 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF492Q9P255 531 aa5.7□□□□□ -1.5
VTI1B-206ENST00000556461 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-206ENST00000556461 FXYD6-FXYD2A0A087WZ82 144 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 CBY3A6NI87 242 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 F5H768 121 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 SMLR1H3BR10 107 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 TAS2R45P59539 299 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 KHDC3LQ587J8 217 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 TMEM78Q5T7P6 136 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 RPL7L1Q6DKI1 246 aaKnown RBP5.69□□□□□ -1.5
VTI1B-206ENST00000556461 SSX7Q7RTT5 188 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 CCDC28AQ8IWP9 274 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 POM121L12Q8N7R1 296 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 OR10G4Q8NGN3 311 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 OR10G9Q8NGN4 311 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 OR10G7Q8NGN6 311 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 OR2T35Q8NGX2 323 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 OR2G3Q8NGZ4 309 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 FAM210BQ96KR6 192 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 HYLS1Q96M11 299 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 PYGO2Q9BRQ0 406 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 GSN-AS1Q9NRJ2 163 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 TP53TG3Q9ULZ0 132 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 TNFSF18Q9UNG2 199 aa5.69□□□□□ -1.5
VTI1B-206ENST00000556461 A0A1W2PPV4 95 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 PGPA6NDG6 321 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 M0R2N4 97 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GAGE7O76087 117 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GPX1P07203 203 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GAGE12FP0CL80 117 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GAGE12GP0CL81 117 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GAGE12IP0CL82 117 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 STAG3L2P0CL84 134 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 ARL14EPLP0DKL9 152 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 P0DMU3 169 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 FAM231AP0DMU4 169 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 FAM231CP0DMU5 169 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 HOXA5P20719 270 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF138P52744 262 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 GNG5P63218 68 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF266Q14584 549 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 DMRTA1Q5VZB9 504 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 Q6ZTI0 123 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 LYPD1Q8N2G4 141 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 PSMG3Q9BT73 122 aaPredicted RBP5.68□□□□□ -1.5
VTI1B-206ENST00000556461 OTORQ9NRC9 128 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 RPH3ALQ9UNE2 315 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 KLF12Q9Y4X4 402 aa5.68□□□□□ -1.5
VTI1B-206ENST00000556461 IGLV2-18A0A075B6J9 118 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 TRAV8-1A0A0A6YYK1 113 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 ATP5G1P05496 136 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 CSN1S1P47710 185 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 ATP5G3P48201 142 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 CDC34P49427 236 aaPredicted RBP5.67□□□□□ -1.5
VTI1B-206ENST00000556461 PQLC2Q6ZP29 291 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 EIF4E3Q8N5X7 224 aaKnown RBP5.67□□□□□ -1.5
VTI1B-206ENST00000556461 INO80EQ8NBZ0 244 aaPredicted RBP5.67□□□□□ -1.5
VTI1B-206ENST00000556461 ASB13Q8WXK3 278 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 RAB24Q969Q5 203 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms