RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
SNX6-206ENST00000556162 VGLL1Q99990 258 aa10.33□□□□□ -0.76
SNX6-206ENST00000556162 M0R2Z0 102 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 IFNA7P01567 189 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 TSPOP30536 169 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 U3KQK5 164 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 ARL2-SNX15V9GYD0 113 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 PAGE4O60829 102 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 ATP6V1G1O75348 118 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 CDKN1BP46527 198 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 GNG5P63218 68 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 BLOC1S1P78537 153 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 ODF3Q96PU9 254 aa10.32□□□□□ -0.76
SNX6-206ENST00000556162 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 K7EQM0 130 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 TCRAP04437 139 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 LEPP41159 167 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 ZNF138P52744 262 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 CCL20P78556 96 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 RARRES2Q99969 163 aa10.31□□□□□ -0.76
SNX6-206ENST00000556162 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 TEX261Q6UWH6 196 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 ZNF492Q9P255 531 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
SNX6-206ENST00000556162 INSP01308 110 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 HIST1H2BAQ96A08 127 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 MANBALQ9NQG1 85 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 GOLT1BQ9Y3E0 138 aa10.3□□□□□ -0.76
SNX6-206ENST00000556162 F6UZH7 168 aa10.29□□□□□ -0.76
SNX6-206ENST00000556162 CCDC28AQ8IWP9 274 aa10.29□□□□□ -0.76
SNX6-206ENST00000556162 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
SNX6-206ENST00000556162 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
SNX6-206ENST00000556162 TMEM208Q9BTX3 173 aa10.29□□□□□ -0.76
SNX6-206ENST00000556162 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 TRBV7-9A0A0J9YWB2 115 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 J3KRW8 73 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 ATP5G3P48201 142 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 ZNF680Q8NEM1 530 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 Q8TAT8 98 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
SNX6-206ENST00000556162 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 PEX7O00628 323 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 IFNA1P01562 189 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 GPX1P07203 203 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 NMBP08949 121 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 CRISP2P16562 243 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 PMS2P11Q13670 270 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.76
SNX6-206ENST00000556162 C1orf158Q8N1D5 194 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.76
SNX6-206ENST00000556162 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.77
SNX6-206ENST00000556162 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
SNX6-206ENST00000556162 KIR3DS1Q14943 382 aa10.27□□□□□ -0.77
SNX6-206ENST00000556162 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.77
SNX6-206ENST00000556162 SGK494Q96LW2 274 aa10.27□□□□□ -0.77
SNX6-206ENST00000556162 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
SNX6-206ENST00000556162 C20orf144Q9BQM9 153 aa10.26□□□□□ -0.77
SNX6-206ENST00000556162 TXNDC17Q9BRA2 123 aa10.26□□□□□ -0.77
SNX6-206ENST00000556162 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 KLLNB2CW77 178 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 MIFP14174 115 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 RNASE4P34096 147 aaKnown RBP10.25□□□□□ -0.77
SNX6-206ENST00000556162 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
SNX6-206ENST00000556162 TMEM256Q8N2U0 113 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 ZFAND2AQ8N6M9 145 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 LINC01587Q99440 93 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 NDFIP1Q9BT67 221 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 X6R8D5 127 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 C7orf71A4D174 169 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 SMIM9A6NGZ8 99 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
SNX6-206ENST00000556162 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 NEU1Q99519 415 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
SNX6-206ENST00000556162 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
SNX6-206ENST00000556162 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
SNX6-206ENST00000556162 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
SNX6-206ENST00000556162 RBMY1CP0DJD4 496 aa10.24□□□□□ -0.77
SNX6-206ENST00000556162 BCL2P10415 239 aa10.24□□□□□ -0.77
SNX6-206ENST00000556162 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
SNX6-206ENST00000556162 H7BYZ3 331 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 UBE2G1P62253 170 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
SNX6-206ENST00000556162 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms