RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-219	ENST00000555906	FAM19A4	Q96LR4	140 aa		13.68	□□□□□ -0.22
PRKCH-219	ENST00000555906	C18orf15	Q96N68	181 aa		13.68	□□□□□ -0.22
PRKCH-219	ENST00000555906	LINC00467	Q9BRT7	94 aa		13.68	□□□□□ -0.22
PRKCH-219	ENST00000555906	NDUFA13	Q9P0J0	144 aa		13.68	□□□□□ -0.22
PRKCH-219	ENST00000555906	CDK2AP2	O75956	126 aa		13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906		Q6ZTI0	123 aa		13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906	C11orf72	Q8NBR9	251 aa		13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906	NPCDR1	Q9BY65	106 aa		13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906	KRTAP1-5	Q9BYS1	174 aa		13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906	GPN1	Q9HCN4	374 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906	MRPS16	Q9Y3D3	137 aa	Known RBP	13.67	□□□□□ -0.22
PRKCH-219	ENST00000555906		A0A1W2PPQ1	181 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	PYY	P10082	97 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	ERCC8	Q13216	396 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	LINC00477	Q96M19	166 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	TIMM9	Q9Y5J7	89 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	DNAH5	Q8TE73	4624 aa		13.66	□□□□□ -0.22
PRKCH-219	ENST00000555906	FAM240B	A0A1B0GVZ2	78 aa		13.65	□□□□□ -0.22
PRKCH-219	ENST00000555906	CRISP2	P16562	243 aa		13.65	□□□□□ -0.22
PRKCH-219	ENST00000555906	BTN1A1	Q13410	526 aa		13.65	□□□□□ -0.22
PRKCH-219	ENST00000555906	ANXA2R	Q3ZCQ2	193 aa		13.65	□□□□□ -0.22
PRKCH-219	ENST00000555906	AAMDC	Q9H7C9	122 aa		13.65	□□□□□ -0.22
PRKCH-219	ENST00000555906	ZNF324	O75467	553 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	BTF3	P20290	206 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	ESRG	Q1W209	222 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	GCSAML	Q5JQS6	135 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	C9orf47	Q6ZRZ4	202 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	EIF4E3	Q8N5X7	224 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	SLC25A2	Q9BXI2	301 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	AGPAT4-IT1	Q9H0P7	198 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	GSN-AS1	Q9NRJ2	163 aa		13.64	□□□□□ -0.23
PRKCH-219	ENST00000555906	TRGV2	A0A075B6R0	118 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	NMB	P08949	121 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	CD300C	Q08708	224 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	MZT2B	Q6NZ67	158 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	EXOC3-AS1	Q8N2X6	119 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	BLNK	Q8WV28	456 aa		13.63	□□□□□ -0.23
PRKCH-219	ENST00000555906	TRGV1	A0A0A0MS02	117 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	TCL1A	P56279	114 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	IBA57	Q5T440	356 aa	Known RBP	13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	LINC00299	Q6ZSB3	139 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	VSIG2	Q96IQ7	327 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	FAM167A-AS1	Q96KT0	104 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	KRTAP4-5	Q9BYR2	181 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	KCNIP2	Q9NS61	270 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	FUT9	Q9Y231	359 aa		13.62	□□□□□ -0.23
PRKCH-219	ENST00000555906	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906		A0A096LPF7	62 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	SPINK4	O60575	86 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	IGKV2D-40	P01614	121 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	ASAH1	Q13510	395 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	ICAM4	Q14773	271 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	TMEM78	Q5T7P6	136 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	ZFAND2A	Q8N6M9	145 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	OR5C1	Q8NGR4	320 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	THAP6	Q8TBB0	222 aa		13.61	□□□□□ -0.23
PRKCH-219	ENST00000555906	GPX1	P07203	203 aa		13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	RNASE4	P34096	147 aa	Known RBP	13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	NHLH2	Q02577	135 aa		13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	MIR17HG	Q75NE6	70 aa		13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	SPATA12	Q7Z6I5	190 aa		13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	MRPL32	Q9BYC8	188 aa	Known RBP	13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906	SLC25A31	Q9H0C2	315 aa		13.6	□□□□□ -0.23
PRKCH-219	ENST00000555906		E5RGE8	158 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	PRR9	Q5T870	116 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	FAM122C	Q6P4D5	195 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	ST6GAL2	Q96JF0	529 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	NMES1	Q9C002	83 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	KLF12	Q9Y4X4	402 aa		13.59	□□□□□ -0.23
PRKCH-219	ENST00000555906	TRBV7-9	A0A0J9YWB2	115 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	RGS13	O14921	159 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	NBEAP1	P0C6P0	100 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	S100Z	Q8WXG8	99 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	FXYD5	Q96DB9	178 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	VGLL1	Q99990	258 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	OR51M1	Q9H341	326 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	ZNF492	Q9P255	531 aa		13.58	□□□□□ -0.24
PRKCH-219	ENST00000555906	IGHV1OR15-1	A0A075B7D0	117 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	MAPKAPK5-AS1	Q8N8E1	139 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	ENKUR	Q8TC29	256 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	PHYHIPL	Q96FC7	376 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	ARPC5L	Q9BPX5	153 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	PAXX	Q9BUH6	204 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	WDR61	Q9GZS3	305 aa	Known RBP	13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	OR5AC2	Q9NZP5	309 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	ICOS	Q9Y6W8	199 aa		13.57	□□□□□ -0.24
PRKCH-219	ENST00000555906	ZNF138	P52744	262 aa		13.56	□□□□□ -0.24
PRKCH-219	ENST00000555906	TP53TG3	Q9ULZ0	132 aa		13.56	□□□□□ -0.24
PRKCH-219	ENST00000555906	SIX6	O95475	246 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	OR10J4	P0C629	311 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	LINC00315	P59091	139 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	ZNF415	Q09FC8	603 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	LRRC37A5P	Q49AS3	106 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906		Q8TAT8	98 aa		13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	MRPL16	Q9NX20	251 aa	Known RBP	13.55	□□□□□ -0.24
PRKCH-219	ENST00000555906	RBAKDN	A6NC62	111 aa		13.54	□□□□□ -0.24
PRKCH-219	ENST00000555906	C17orf112	F2Z3M2	114 aa		13.54	□□□□□ -0.24
PRKCH-219	ENST00000555906		H0YIZ8	118 aa		13.54	□□□□□ -0.24
PRKCH-219	ENST00000555906	SIVA1	O15304	175 aa		13.54	□□□□□ -0.24
PRKCH-219	ENST00000555906	PAX4	O43316	350 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms