RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 IGHV3OR16-8A0A075B7F1 116 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 PNMA8CA0A1B0GUJ8 204 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 LOC107986453A0A1B0GWG9 222 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 ZNF736B4DX44 427 aaPredicted RBP2.33□□□□□ -2.04
KTN1-220ENST00000555172 M0R2P5 195 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 CPSF4O95639 269 aaKnown RBP2.33□□□□□ -2.04
KTN1-220ENST00000555172 CRPP02741 224 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
KTN1-220ENST00000555172 KRTAP10-3P60369 221 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 LSM3P62310 102 aaKnown RBP2.33□□□□□ -2.04
KTN1-220ENST00000555172 ZNF846Q147U1 533 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 SPINK14Q6IE38 97 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 Q6ZS92 163 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 SERP1Q9Y6X1 66 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 AKAP11Q9UKA4 1901 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 AKAP12Q02952 1782 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 MYH1P12882 1939 aa2.33□□□□□ -2.04
KTN1-220ENST00000555172 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 IGKV3-15P01624 115 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 COX6A1P12074 109 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 TMEM136Q6ZRR5 245 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 HYLS1Q96M11 299 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 SAR1AQ9NR31 198 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 S4R3C0 116 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 TUBGCP6Q96RT7 1819 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 SNRNP200O75643 2136 aaKnown RBP2.32□□□□□ -2.04
KTN1-220ENST00000555172 LTBP4Q8N2S1 1624 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 IGHV1-24A0A0C4DH33 117 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 H3BQF6 201 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 M0R233 179 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 PMP2P02689 132 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 MT-ATP8P03928 68 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 OR2T35Q8NGX2 323 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 RAB37Q96AX2 223 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 HHLA3Q9XRX5 114 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 SCN3AQ9NY46 2000 aa2.32□□□□□ -2.04
KTN1-220ENST00000555172 SCN4AP35499 1836 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 C3orf85A0A1B0GTC6 90 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 ZNF705FA8MVS1 300 aaPredicted RBP2.31□□□□□ -2.04
KTN1-220ENST00000555172 C5orf67F2Z3F1 127 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 EDF1O60869 148 aaKnown RBP2.31□□□□□ -2.04
KTN1-220ENST00000555172 CISD3P0C7P0 127 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 SAA1P0DJI8 122 aaPredicted RBP2.31□□□□□ -2.04
KTN1-220ENST00000555172 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 CXCL16Q9H2A7 254 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 NOP16Q9Y3C1 178 aaKnown RBP2.31□□□□□ -2.04
KTN1-220ENST00000555172 LY96Q9Y6Y9 160 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 QRICH2Q9H0J4 1663 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 NACAE9PAV3 2078 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 SDK2Q58EX2 2172 aa2.31□□□□□ -2.04
KTN1-220ENST00000555172 A0A0J9YX75 114 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 PIK3C2AO00443 1686 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 HYPMO75409 117 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 PTPRBP23467 1997 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 SNCAP37840 140 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 S100A7L2Q5SY68 101 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 ATP11AUNQ6ZP68 121 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 KTN1Q86UP2 1357 aaKnown RBP2.3□□□□□ -2.04
KTN1-220ENST00000555172 TSKUQ8WUA8 353 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 PHIPQ8WWQ0 1821 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 KLK12Q9UKR0 248 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 KIAA1107Q9UPP5 1409 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 R4GN34 69 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 MICAL3Q7RTP6 2002 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 CDC42BPBQ9Y5S2 1711 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 COL2A1P02458 1487 aaPredicted RBP2.3□□□□□ -2.04
KTN1-220ENST00000555172 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 hDV103S1A0JD37 113 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 LYRM1O43325 122 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 IL5P05113 134 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 PSMF1Q92530 271 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 DPY30Q9C005 99 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 TMEM242Q9NWH2 141 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 ARHGAP32A7KAX9 2087 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 PLXNA3P51805 1871 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 WNK3Q9BYP7 1800 aa2.3□□□□□ -2.04
KTN1-220ENST00000555172 MUC4Q99102 2169 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 OR51F1A6NGY5 319 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 OR2T2Q6IF00 324 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 COPS9Q8WXC6 57 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 NHP2Q9NX24 153 aaKnown RBP2.29□□□□□ -2.04
KTN1-220ENST00000555172 SMAD5-AS1Q9Y6J3 95 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 KIF25-AS1Q9Y6Z4 181 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 RP1P56715 2156 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 ADGRB1O14514 1584 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 MCM3APO60318 1980 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 MED14O60244 1454 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 CFTRP13569 1480 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 CPAMD8Q8IZJ3 1885 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 TCRBV3S1A0A5B6 114 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 P0C880 135 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 ETV6P41212 452 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 NPC2P61916 151 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 ZNF345Q14585 488 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 LINC00301Q8NCQ3 95 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 VAMP8Q9BV40 100 aa2.29□□□□□ -2.04
KTN1-220ENST00000555172 TP53TG3Q9ULZ0 132 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 1631.6 ms