RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 VCYO14598 125 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SPINK4O60575 86 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TSHBP01222 138 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 INSP01308 110 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SFTA3P0C7M3 94 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 GATA1P15976 413 aaPredicted RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 ORM2P19652 201 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 RCVRNP35243 200 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 GPX4P36969 197 aaPredicted RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 ID1P41134 155 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 CDKN1BP46527 198 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 CRYBA4P53673 196 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 FGL1Q08830 312 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 BTN1A1Q13410 526 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SCGB2B2Q4G0G5 96 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 C1orf194Q5T5A4 169 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SPATA31B1PQ5VZV4 182 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 EBLN2Q6P2I7 272 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 PQLC2Q6ZP29 291 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SCXQ7RTU7 201 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM144Q7Z5S9 345 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 OR8I2Q8N0Y5 310 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 LGI3Q8N145 548 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 CENPSQ8N2Z9 138 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 Q8N814 137 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM229BQ8NBD8 167 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF738Q8NE65 137 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TERB2Q8NHR7 220 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 DTD1Q8TEA8 209 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM37Q8WXS4 190 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 RBPMSQ93062 196 aaKnown RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 RRNAD1Q96FB5 475 aaKnown RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 SHANK2-AS3Q9BTD1 123 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM208Q9BTX3 173 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF331Q9NQX6 463 aaPredicted RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 MRPL16Q9NX20 251 aaKnown RBP2.04□□□□□ -2.08
SLIRP-202ENST00000553981 COPZ2Q9P299 210 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 Q9UF83 564 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 RAB26Q9ULW5 256 aa2.04□□□□□ -2.08
SLIRP-202ENST00000553981 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 SNRPGP15A8MWD9 76 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 H3BNG1 76 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 H3BP45 60 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 K7EQD1 137 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 LECT2O14960 151 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 GSTZ1O43708 216 aaPredicted RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 DUSP14O95147 198 aaKnown RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 RAB3DO95716 219 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 APOA1P02647 267 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 LINC00869P0C866 280 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 SULT1A3P0DMM9 295 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 SULT1A4P0DMN0 295 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 RANBP1P43487 201 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 PLP1P60201 277 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 RHOBP62745 196 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 DAZ2Q13117 558 aaKnown RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 RNASE10Q5GAN6 216 aaKnown RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 TTC32Q5I0X7 151 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 GPR107Q5VW38 600 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 STEAP1BQ6NZ63 245 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 CYP2G1PQ6ZSU1 146 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 ACOT7LQ6ZUV0 252 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 GPR141Q7Z602 305 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 ZFAND2AQ8N6M9 145 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 OR51S1Q8NGJ8 323 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 OR4D5Q8NGN0 318 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 OR1B1Q8NGR6 318 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 THAP6Q8TBB0 222 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 CIRBP-AS1Q8TBR5 109 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 BORCS5Q969J3 196 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 RPUSD4Q96CM3 377 aaKnown RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 NARS2Q96I59 477 aaKnown RBP2.03□□□□□ -2.08
SLIRP-202ENST00000553981 LINC00477Q96M19 166 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 LINC00467Q9BRT7 94 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM70Q9BUB7 260 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 PDCD10Q9BUL8 212 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 FUNDC2Q9BWH2 189 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 ENY2Q9NPA8 101 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 EXTL2Q9UBQ6 330 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 PYGO1Q9Y3Y4 419 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 U3KQ87 197 aa2.03□□□□□ -2.08
SLIRP-202ENST00000553981 TRGV1A0A0A0MS02 117 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 A0A0B4J2A0 478 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 PGPEP1LA6NFU8 196 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 KLLNB2CW77 178 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 E5RGE8 158 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 H7BYZ3 331 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 WRBO00258 174 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ADAP1O75689 374 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 B3GALNT1O75752 331 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 TNFAIP8O95379 198 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 IFNA5P01569 189 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 RLN2P04090 185 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 SMIM18P0DKX4 95 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 IGLC2P0DOY2 106 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 ASIPP42127 132 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 GALR1P47211 349 aa2.02□□□□□ -2.09
SLIRP-202ENST00000553981 CCR6P51684 374 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 1049.5 ms