RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 RNASE8Q8TDE3 154 aaKnown RBP13.32□□□□□ -0.28
HDAC4-217ENST00000553145 LINC00477Q96M19 166 aa13.32□□□□□ -0.28
HDAC4-217ENST00000553145 Q9H3A6 140 aa13.32□□□□□ -0.28
HDAC4-217ENST00000553145 KLLNB2CW77 178 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 HMGB3O15347 200 aaKnown RBP13.31□□□□□ -0.28
HDAC4-217ENST00000553145 HTN3P15516 51 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 OR2G3Q8NGZ4 309 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 C16orf74Q96GX8 76 aa13.31□□□□□ -0.28
HDAC4-217ENST00000553145 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
HDAC4-217ENST00000553145 CD300CQ08708 224 aa13.3□□□□□ -0.28
HDAC4-217ENST00000553145 BTN1A1Q13410 526 aa13.3□□□□□ -0.28
HDAC4-217ENST00000553145 LYPD1Q8N2G4 141 aa13.3□□□□□ -0.28
HDAC4-217ENST00000553145 INO80EQ8NBZ0 244 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-217ENST00000553145 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
HDAC4-217ENST00000553145 PSMG3Q9BT73 122 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-217ENST00000553145 SH3BGRL3Q9H299 93 aa13.3□□□□□ -0.28
HDAC4-217ENST00000553145 EPPK1P58107 5090 aaKnown RBP13.29□□□□□ -0.28
HDAC4-217ENST00000553145 C7orf71A4D174 169 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 SLC25A5P05141 298 aaKnown RBP13.29□□□□□ -0.28
HDAC4-217ENST00000553145 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 CRISP2P16562 243 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 TMEM78Q5T7P6 136 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 PRR9Q5T870 116 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 RPL7L1Q6DKI1 246 aaKnown RBP13.29□□□□□ -0.28
HDAC4-217ENST00000553145 ZNF493Q6ZR52 646 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 ZFAND2AQ8N6M9 145 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 Q8TAT8 98 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 NDUFAF3Q9BU61 184 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
HDAC4-217ENST00000553145 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-217ENST00000553145 PQLC2Q6ZP29 291 aa13.28□□□□□ -0.28
HDAC4-217ENST00000553145 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
HDAC4-217ENST00000553145 TIMM8BQ9Y5J9 83 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-217ENST00000553145 SMLR1H3BR10 107 aa13.27□□□□□ -0.29
HDAC4-217ENST00000553145 ZNF324O75467 553 aaPredicted RBP13.27□□□□□ -0.29
HDAC4-217ENST00000553145 RNASE4P34096 147 aaKnown RBP13.27□□□□□ -0.29
HDAC4-217ENST00000553145 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
HDAC4-217ENST00000553145 KMT2AQ03164 3969 aa13.27□□□□□ -0.29
HDAC4-217ENST00000553145 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 ARL14EPLP0DKL9 152 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 CSN1S1P47710 185 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 ZNF138P52744 262 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 SERF2P84101 59 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 Q6ZQT7 251 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 CCDC28AQ8IWP9 274 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 RAB24Q969Q5 203 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 HYLS1Q96M11 299 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
HDAC4-217ENST00000553145 PGPA6NDG6 321 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 DIRC3C9JPN6 131 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 ARPC5O15511 151 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 GPX1P07203 203 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 SSX7Q7RTT5 188 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 FAM210BQ96KR6 192 aa13.25□□□□□ -0.29
HDAC4-217ENST00000553145 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
HDAC4-217ENST00000553145 NMBP08949 121 aa13.24□□□□□ -0.29
HDAC4-217ENST00000553145 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
HDAC4-217ENST00000553145 DNAH6Q9C0G6 4158 aa13.24□□□□□ -0.29
HDAC4-217ENST00000553145 CBY3A6NI87 242 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 MBP02144 154 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 LINC00612Q8N6U2 182 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 C11orf72Q8NBR9 251 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 RXFP4Q8TDU9 374 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-217ENST00000553145 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 CYTL1Q9NRR1 136 aa13.23□□□□□ -0.29
HDAC4-217ENST00000553145 TRBV7-9A0A0J9YWB2 115 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 ATP5G1P05496 136 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 GCHFRP30047 84 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 ATP5G3P48201 142 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 GNG5P63218 68 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 SUN5Q8TC36 379 aa13.22□□□□□ -0.29
HDAC4-217ENST00000553145 SNURFLB1AK76 121 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 F5H768 121 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 P0DMU3 169 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 FAM231AP0DMU4 169 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 FAM231CP0DMU5 169 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 FAM74A1Q5RGS3 127 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.29
HDAC4-217ENST00000553145 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 ACTR3CQ9C0K3 210 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-217ENST00000553145 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
HDAC4-217ENST00000553145 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 GAGE7O76087 117 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
HDAC4-217ENST00000553145 ANXA2RQ3ZCQ2 193 aa13.2□□□□□ -0.3
HDAC4-217ENST00000553145 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms