RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 OR2T35Q8NGX2 323 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 ATP6V0E2Q8NHE4 81 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 UBALD1Q8TB05 177 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 TMEM106BQ9NUM4 274 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 LY96Q9Y6Y9 160 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 ADGRL1O94910 1474 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 MAP3K1Q13233 1512 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 KDM5DQ9BY66 1539 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 SMIM31A0A1B0GVY4 71 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 C11orf86A6NJI1 115 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 COLCA2A8K830 154 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 CLPSP04118 112 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 IL4P05112 153 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 FP248Q71RG6 208 aaPredicted RBP3.97□□□□□ -1.77
VPS29-210ENST00000552130 C10orf105Q8TEF2 133 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 CST11Q9H112 138 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 BET1LQ9NYM9 111 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 TRPM6Q9BX84 2022 aa3.97□□□□□ -1.77
VPS29-210ENST00000552130 LTBP4Q8N2S1 1624 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 IGLV1-51P01701 117 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 ZNF14P17017 642 aaPredicted RBP3.96□□□□□ -1.78
VPS29-210ENST00000552130 Q6ZQT0 140 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 Q8N814 137 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 KLF14Q8TD94 323 aaPredicted RBP3.96□□□□□ -1.78
VPS29-210ENST00000552130 MED9Q9NWA0 146 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 NYNRINQ9P2P1 1898 aaKnown RBP3.96□□□□□ -1.78
VPS29-210ENST00000552130 MYO9BQ13459 2157 aa3.96□□□□□ -1.78
VPS29-210ENST00000552130 HELZP42694 1942 aaKnown RBP3.95□□□□□ -1.78
VPS29-210ENST00000552130 PTPRSQ13332 1948 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 PTPRBP23467 1997 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 TRAV3A0A0B4J244 114 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 C16orf90A8MZG2 172 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 CISD3P0C7P0 127 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 VSTM2AQ8TAG5 236 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 DSCR8Q96T75 97 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 GREB1Q4ZG55 1949 aa3.95□□□□□ -1.78
VPS29-210ENST00000552130 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 ZNF705FA8MVS1 300 aaPredicted RBP3.94□□□□□ -1.78
VPS29-210ENST00000552130 B4DSR2 109 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 J3QLW9 94 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 M0R233 179 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 SNCGO76070 127 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 WISP3O95389 354 aaPredicted RBP3.94□□□□□ -1.78
VPS29-210ENST00000552130 IL5P05113 134 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 ROMO1P60602 79 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 Q6ZR54 194 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 Q6ZS52 159 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 Q8NAQ8 132 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 SPTSSAQ969W0 71 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 SLC50A1Q9BRV3 221 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 TMEM242Q9NWH2 141 aa3.94□□□□□ -1.78
VPS29-210ENST00000552130 TRPM3Q9HCF6 1732 aaPredicted RBP3.94□□□□□ -1.78
VPS29-210ENST00000552130 DIDO1Q9BTC0 2240 aaKnown RBP3.94□□□□□ -1.78
VPS29-210ENST00000552130 IGLV4-69A0A075B6H9 119 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 A0A1B0GU33 70 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 E7EQL1 145 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 RPL36A-HNRNPH2H7BZ11 118 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 NDUFB6O95139 128 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 Q0VG73 95 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 NNATQ16517 81 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 FAM74A1Q5RGS3 127 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 Q96M85 177 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 NPVFQ9HCQ7 196 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 MINOS1-NBL1R4GNA1 71 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 ARHGAP5Q13017 1502 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 RBBP6Q7Z6E9 1792 aaKnown RBP3.93□□□□□ -1.78
VPS29-210ENST00000552130 MYH1P12882 1939 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 DNMBPQ6XZF7 1577 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 THADAQ6YHU6 1953 aa3.93□□□□□ -1.78
VPS29-210ENST00000552130 FYCO1Q9BQS8 1478 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 IGLV3-12A0A075B6K2 115 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 G3V3Q6 166 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 C1orf134Q5TEV5 83 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 LYPD6Q86Y78 171 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 TSKUQ8WUA8 353 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 HHLA3Q9XRX5 114 aa3.92□□□□□ -1.78
VPS29-210ENST00000552130 RBAKDNA6NC62 111 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 RTEL1-TNFRSF6BF6WH68 1400 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 H3BQ15 152 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 SSSCA1O60232 199 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 CRPP02741 224 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 MGST1P10620 155 aaKnown RBP3.91□□□□□ -1.78
VPS29-210ENST00000552130 COX7CP15954 63 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 SNCAP37840 140 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 DCDP81605 110 aaKnown RBP3.91□□□□□ -1.78
VPS29-210ENST00000552130 LPAL2Q16609 132 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 C12orf73Q69YU5 71 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
VPS29-210ENST00000552130 OR8B2Q96RD0 313 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms