RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ISOC1Q96CN7 298 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 CMBLQ96DG6 245 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 MS4A6EQ96DS6 147 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 THTPAQ9BU02 230 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 GNB1LQ9BYB4 327 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 C20orf27Q9GZN8 174 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 UQCC1Q9NVA1 299 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 LAMTOR2Q9Y2Q5 125 aa3.2□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-206ENST00000550987 HEATR1Q9H583 2144 aaKnown RBP3.2□□□□□ -1.9
CPSF6-206ENST00000550987 TRAV8-1A0A0A6YYK1 113 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 RIIAD1A6NNX1 92 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 KNCNA6PVL3 124 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 F5H5P2 479 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 M0R2Z0 102 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 LY6HO94772 140 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 NRASP01111 189 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 HRASP01112 189 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 KRASP01116 189 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 IFNA7P01567 189 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 CECR9P0C854 216 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 FGF6P10767 208 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 ZNF32P17041 273 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 NTF3P20783 257 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 RPS4Y1P22090 263 aaKnown RBP3.19□□□□□ -1.9
CPSF6-206ENST00000550987 SRIP30626 198 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 RPL35P42766 123 aaKnown RBP3.19□□□□□ -1.9
CPSF6-206ENST00000550987 INPP1P49441 399 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 PKIAP61925 76 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 CAV1Q03135 178 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 BSPH1Q075Z2 132 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 EIF4EBP1Q13541 118 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-206ENST00000550987 OR8G1Q15617 311 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 CENPWQ5EE01 88 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 GLYATQ6IB77 296 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 LCN8Q6JVE9 175 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 TCF23Q7RTU1 214 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 CROCCP2Q86T23 111 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 ANKRD29Q8N6D5 301 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 NUP35Q8NFH5 326 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 LINC01587Q99440 93 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 LINC00470Q9BZP3 86 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 COMMD5Q9GZQ3 224 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 OR2D2Q9H210 308 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 RNF122Q9H9V4 155 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM38BQ9NVV0 291 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 MRPL16Q9NX20 251 aaKnown RBP3.19□□□□□ -1.9
CPSF6-206ENST00000550987 MED11Q9P086 117 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 ERG28Q9UKR5 140 aa3.19□□□□□ -1.9
CPSF6-206ENST00000550987 ARFGEF3Q5TH69 2177 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 NACAE9PAV3 2078 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 A0A087WUU8 490 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 E7EQL1 145 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 GYG2O15488 501 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 CLPSP04118 112 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 SCTP09683 121 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 OR12D1P0DN82 309 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 CTLA4P16410 223 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-206ENST00000550987 MPV17P39210 176 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 EIF2B2P49770 351 aaKnown RBP3.18□□□□□ -1.9
CPSF6-206ENST00000550987 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
CPSF6-206ENST00000550987 EFNA4P52798 201 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 C12orf74Q32Q52 190 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 KRTCAP2Q8N6L1 136 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 LY6G5BQ8NDX9 201 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 CCL17Q92583 94 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 SLC25A44Q96H78 314 aaPredicted RBP3.18□□□□□ -1.9
CPSF6-206ENST00000550987 PRSS27Q9BQR3 290 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM147Q9BVK8 224 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 RNASE7Q9H1E1 156 aaKnown RBP3.18□□□□□ -1.9
CPSF6-206ENST00000550987 TAF9BQ9HBM6 251 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 POPDC3Q9HBV1 291 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 SND1-IT1Q9HBX3 110 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 CBLN4Q9NTU7 201 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CPSF6-206ENST00000550987 IGHV2-26A0A0B4J1V2 119 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 TMEM269A0A1B0GVZ9 245 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 C17orf51A8MQB3 221 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 A8MT66 165 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 J3QR89 54 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
CPSF6-206ENST00000550987 OR2H2O95918 312 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 CPMP14384 443 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 PPIBP23284 216 aaKnown RBP3.17□□□□□ -1.9
CPSF6-206ENST00000550987 EVX1P49640 407 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 CTBP2P56545 445 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 PLCXD2Q0VAA5 305 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 FABP9Q0Z7S8 132 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 RHEBQ15382 184 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 KCNJ8Q15842 424 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 NEDD8Q15843 81 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 TCTE3Q8IZS6 198 aa3.17□□□□□ -1.9
CPSF6-206ENST00000550987 OR8I2Q8N0Y5 310 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms