RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 A0A1B0GXF2 115 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 TMEM213A2RRL7 107 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 RBPMS2Q6ZRY4 209 aaKnown RBP8.51□□□□□ -1.05
CUX1-212ENST00000547394 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 SPRY2O43597 315 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 CT45A10P0DMU9 189 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 ATOH7Q8N100 152 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 SIGLECL1Q8N7X8 197 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 METTL26Q96S19 204 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 TXN2Q99757 166 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 ZNF492Q9P255 531 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 SCGB2A1O75556 95 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 IGF1P05019 195 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 TM4SF20Q53R12 229 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 C19orf54Q5BKX5 351 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 PRR25Q96S07 402 aa8.51□□□□□ -1.05
CUX1-212ENST00000547394 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
CUX1-212ENST00000547394 BEX4Q9NWD9 120 aaPredicted RBP8.51□□□□□ -1.05
CUX1-212ENST00000547394 A0A096LNT2 108 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 SERTM2A0A1B0GWG4 89 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 PSG9Q00887 426 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 Q0VG73 95 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 PDE6HQ13956 83 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 LYPD1Q8N2G4 141 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 OR4X2Q8NGF9 303 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 NAGKQ9UJ70 344 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 RNF24Q9Y225 148 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 TRBV7-1A0A0A6YYK4 115 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 TRAV8-2A0A0B4J237 113 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 GPX1P07203 203 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 LINC01356Q8N9X3 169 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 GLMPQ8WWB7 406 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 NRN1Q9NPD7 142 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
CUX1-212ENST00000547394 F6UB75 175 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 IGHG2P01859 326 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 ORM1P02763 201 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 Q5PR19 223 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 CYB5R2Q6BCY4 276 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 LYZL1Q6UWQ5 148 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 MCRIP2Q9BUT9 160 aaKnown RBP8.49□□□□□ -1.05
CUX1-212ENST00000547394 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 Q96MF0 132 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 MSRB1Q9NZV6 116 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
CUX1-212ENST00000547394 TMEM189A5PLL7 270 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 FXYD7P58549 80 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 C1orf194Q5T5A4 169 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
CUX1-212ENST00000547394 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 S100A7AQ86SG5 101 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 WIPF2Q8TF74 440 aaPredicted RBP8.48□□□□□ -1.05
CUX1-212ENST00000547394 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 CR1P17927 2039 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 M0R143 59 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 ZNF324O75467 553 aaPredicted RBP8.48□□□□□ -1.05
CUX1-212ENST00000547394 NIT1Q86X76 327 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 WFDC3Q8IUB2 231 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 AGPAT4-IT1Q9H0P7 198 aa8.48□□□□□ -1.05
CUX1-212ENST00000547394 A0A1B0GUT8 65 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 H0Y8G0 127 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 SMKR1H3BMG3 65 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 RAB9AP51151 201 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 MAJINQ3KP22 176 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 HSBP1O75506 76 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 TFPI2P48307 235 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 PDZD2O15018 2839 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 KIR2DL5BA0A0G2JN68 375 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 KIR2DL5BA0A0G2JPC4 375 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 LOC389332A0A1B0GUA5 103 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 IGHV4-31P0DP07 118 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 SLC25A16P16260 332 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 ZNF25P17030 456 aaPredicted RBP8.47□□□□□ -1.05
CUX1-212ENST00000547394 FOXE3Q13461 319 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 CT83Q5H943 113 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 KIR2DL5AQ8N109 375 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 C11orf21Q9P2W6 132 aa8.47□□□□□ -1.05
CUX1-212ENST00000547394 JMJD1CQ15652 2540 aa8.46□□□□□ -1.05
CUX1-212ENST00000547394 FAM223BA6NKX1 122 aa8.46□□□□□ -1.05
CUX1-212ENST00000547394 M0R2Z0 102 aa8.46□□□□□ -1.05
CUX1-212ENST00000547394 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.05
CUX1-212ENST00000547394 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.05
CUX1-212ENST00000547394 AGRNO00468 2067 aa8.46□□□□□ -1.06
CUX1-212ENST00000547394 LOC102724200A0A096LPH7 203 aaPredicted RBP8.46□□□□□ -1.06
CUX1-212ENST00000547394 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.06
CUX1-212ENST00000547394 HOXA3O43365 443 aaPredicted RBP8.46□□□□□ -1.06
CUX1-212ENST00000547394 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms