RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ERCC8Q13216 396 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 GCSAMLQ5JQS6 135 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 TMEM78Q5T7P6 136 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 ZNF680Q8NEM1 530 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 RXFP4Q8TDU9 374 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 RNF141Q8WVD5 230 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 LINC00467Q9BRT7 94 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 MARVELD1Q9BSK0 173 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 SLC25A2Q9BXI2 301 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
YBX3-218ENST00000546298 AGPAT4-IT1Q9H0P7 198 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 OR5AC2Q9NZP5 309 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
YBX3-218ENST00000546298 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 KLLNB2CW77 178 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 H0YIZ8 118 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 H3BNG1 76 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 IFNA5P01569 189 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 GPX1P07203 203 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 CRISP2P16562 243 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
YBX3-218ENST00000546298 CSN1S1P47710 185 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 ICAM4Q14773 271 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 ANXA2RQ3ZCQ2 193 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 C9orf47Q6ZRZ4 202 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 EXOC3-AS1Q8N2X6 119 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 EIF4E3Q8N5X7 224 aaKnown RBP6.55□□□□□ -1.36
YBX3-218ENST00000546298 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 SCGB1C1Q8TD33 95 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 PPP1R1CQ8WVI7 109 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 FAM167A-AS1Q96KT0 104 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 ATP5SQ99766 215 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 PAXXQ9BUH6 204 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 FUT9Q9Y231 359 aa6.55□□□□□ -1.36
YBX3-218ENST00000546298 TRGV2A0A075B6R0 118 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 TRAV26-1A0A087WT03 109 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 TRBV7-9A0A0J9YWB2 115 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 RGS13O14921 159 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 OR7C2O60412 319 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 TAS2R45P59539 299 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 IFITM3Q01628 133 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 FAM122CQ6P4D5 195 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 LYPD1Q8N2G4 141 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 LINC00588Q9Y4M8 146 aa6.54□□□□□ -1.36
YBX3-218ENST00000546298 A0A0J9YY99 117 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 RBAKDNA6NC62 111 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 ZNF324O75467 553 aaPredicted RBP6.53□□□□□ -1.36
YBX3-218ENST00000546298 MPC2O95563 127 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 OR10J4P0C629 311 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 RPL12P30050 165 aaKnown RBP6.53□□□□□ -1.36
YBX3-218ENST00000546298 ZNF138P52744 262 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 H2BFSP57053 126 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 CD300CQ08708 224 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 BTN1A1Q13410 526 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 TTC32Q5I0X7 151 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 FXYD5Q96DB9 178 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 Q9H8V8 135 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 GSN-AS1Q9NRJ2 163 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 HSPB11Q9Y547 144 aa6.53□□□□□ -1.36
YBX3-218ENST00000546298 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
YBX3-218ENST00000546298 TRGV1A0A0A0MS02 117 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
YBX3-218ENST00000546298 HOXA5P20719 270 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 TCL1AP56279 114 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
YBX3-218ENST00000546298 UBE2L3P68036 154 aaKnown RBP6.52□□□□□ -1.37
YBX3-218ENST00000546298 KHDC3LQ587J8 217 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 IBA57Q5T440 356 aaKnown RBP6.52□□□□□ -1.37
YBX3-218ENST00000546298 Q6ZTI0 123 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 ZFAND2AQ8N6M9 145 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 VGLL1Q99990 258 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 TMPRSS5Q9H3S3 457 aa6.52□□□□□ -1.37
YBX3-218ENST00000546298 SPINK4O60575 86 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 SLAQ13239 276 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
YBX3-218ENST00000546298 FAM74A1Q5RGS3 127 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 PHYHIPLQ96FC7 376 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 UPK3BQ9BT76 320 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 SMIM3Q9BZL3 60 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 Q9H3A6 140 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 BATF3Q9NR55 127 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 MRPS16Q9Y3D3 137 aaKnown RBP6.51□□□□□ -1.37
YBX3-218ENST00000546298 LENEPQ9Y5L5 61 aa6.51□□□□□ -1.37
YBX3-218ENST00000546298 A0A1W2PPQ1 181 aa6.5□□□□□ -1.37
YBX3-218ENST00000546298 A0A1W2PPV4 95 aa6.5□□□□□ -1.37
YBX3-218ENST00000546298 BTF3P20290 206 aaKnown RBP6.5□□□□□ -1.37
YBX3-218ENST00000546298 ZNF415Q09FC8 603 aa6.5□□□□□ -1.37
YBX3-218ENST00000546298 ZNF266Q14584 549 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms