RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 LINC00612Q8N6U2 182 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 ENKURQ8TC29 256 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 PFDN5Q99471 154 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 MBD2Q9UBB5 411 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 TRBV19A0A075B6N1 114 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 TRAV12-3A0A0B4J271 114 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 ERCC8Q13216 396 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 GCSAMLQ5JQS6 135 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 ARL6IP6Q8N6S5 226 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 ODF3Q96PU9 254 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 GPN1Q9HCN4 374 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-206ENST00000543881 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 ZNF253O75346 499 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 SIX6O95475 246 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 PYYP10082 97 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 HOXA5P20719 270 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 HBG1P69891 147 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 HBG2P69892 147 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 NHLH2Q02577 135 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 ASAH1Q13510 395 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 ATP6V1FQ16864 119 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 STX12Q86Y82 276 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 TMEM14CQ9P0S9 112 aa8.25□□□□□ -1.09
GABPB1-206ENST00000543881 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 GAGE12BA1L429 117 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 GAGE7O76087 117 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 GAGE12FP0CL80 117 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 GAGE12GP0CL81 117 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 GAGE12IP0CL82 117 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 HIST1H1EP10412 219 aaKnown RBP8.24□□□□□ -1.09
GABPB1-206ENST00000543881 LEPP41159 167 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 SSTP61278 116 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 IFITM3Q01628 133 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 MZT2BQ6NZ67 158 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 MRPL53Q96EL3 112 aaKnown RBP8.24□□□□□ -1.09
GABPB1-206ENST00000543881 FAM19A4Q96LR4 140 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 NPCDR1Q9BY65 106 aa8.24□□□□□ -1.09
GABPB1-206ENST00000543881 TRAV26-1A0A087WT03 109 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 LINC00862A6NCI5 91 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 H0YIZ8 118 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 UPK1BO75841 260 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 OR5I1Q13606 314 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 EXOC3-AS1Q8N2X6 119 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 THAP6Q8TBB0 222 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 FAM167A-AS1Q96KT0 104 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 SLC25A2Q9BXI2 301 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 OR5AC2Q9NZP5 309 aa8.23□□□□□ -1.09
GABPB1-206ENST00000543881 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-206ENST00000543881 A0A0J9YY99 117 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 KLLNB2CW77 178 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 MPDU1O75352 247 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 ZNF324O75467 553 aaPredicted RBP8.22□□□□□ -1.09
GABPB1-206ENST00000543881 SNAPINO95295 136 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 RLN2P04090 185 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 CCL18P55774 89 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 BTN1A1Q13410 526 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 Q6ZTI0 123 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 MIR17HGQ75NE6 70 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 SSX7Q7RTT5 188 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 OR5C1Q8NGR4 320 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 RXFP4Q8TDU9 374 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 BLNKQ8WV28 456 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 TIMM9Q9Y5J7 89 aa8.22□□□□□ -1.09
GABPB1-206ENST00000543881 C7orf71A4D174 169 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 SNURFLB1AK76 121 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.09
GABPB1-206ENST00000543881 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.09
GABPB1-206ENST00000543881 PDE6HQ13956 83 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 CLINT1Q14677 625 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 ZFP69Q49AA0 526 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 LRRC37A5PQ49AS3 106 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 Q6ZQT7 251 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 GNPNAT1Q96EK6 184 aaPredicted RBP8.21□□□□□ -1.09
GABPB1-206ENST00000543881 LINC00477Q96M19 166 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 TMPRSS5Q9H3S3 457 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 GSN-AS1Q9NRJ2 163 aa8.21□□□□□ -1.09
GABPB1-206ENST00000543881 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-206ENST00000543881 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
GABPB1-206ENST00000543881 ICAM4Q14773 271 aa8.2□□□□□ -1.1
GABPB1-206ENST00000543881 PRR9Q5T870 116 aa8.2□□□□□ -1.1
GABPB1-206ENST00000543881 VGLL1Q99990 258 aa8.2□□□□□ -1.1
GABPB1-206ENST00000543881 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
GABPB1-206ENST00000543881 NMES1Q9C002 83 aa8.2□□□□□ -1.1
GABPB1-206ENST00000543881 E5RGE8 158 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 NBEAP1P0C6P0 100 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 CRISP2P16562 243 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 RNASE4P34096 147 aaKnown RBP8.19□□□□□ -1.1
GABPB1-206ENST00000543881 H2BFSP57053 126 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 ESRGQ1W209 222 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 C9orf47Q6ZRZ4 202 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 ZFAND2AQ8N6M9 145 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 FXYD5Q96DB9 178 aa8.19□□□□□ -1.1
GABPB1-206ENST00000543881 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms