RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
DDB1-223ENST00000543658 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
DDB1-223ENST00000543658 LINC00862A6NCI5 91 aa8.8□□□□□ -1
DDB1-223ENST00000543658 NDUFS6O75380 124 aaKnown RBP8.8□□□□□ -1
DDB1-223ENST00000543658 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
DDB1-223ENST00000543658 RPL35AP18077 110 aaKnown RBP8.8□□□□□ -1
DDB1-223ENST00000543658 TSPOP30536 169 aa8.8□□□□□ -1
DDB1-223ENST00000543658 LEPP41159 167 aa8.8□□□□□ -1
DDB1-223ENST00000543658 ZNF138P52744 262 aa8.8□□□□□ -1
DDB1-223ENST00000543658 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
DDB1-223ENST00000543658 ZNF674Q2M3X9 581 aa8.8□□□□□ -1
DDB1-223ENST00000543658 UQCC3Q6UW78 93 aa8.8□□□□□ -1
DDB1-223ENST00000543658 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
DDB1-223ENST00000543658 PRNTQ86SH4 94 aa8.8□□□□□ -1
DDB1-223ENST00000543658 Q8N1Y9 231 aa8.8□□□□□ -1
DDB1-223ENST00000543658 SGK494Q96LW2 274 aa8.8□□□□□ -1
DDB1-223ENST00000543658 VGLL1Q99990 258 aa8.8□□□□□ -1
DDB1-223ENST00000543658 PSG8Q9UQ74 426 aa8.8□□□□□ -1
DDB1-223ENST00000543658 TRAV8-1A0A0A6YYK1 113 aa8.79□□□□□ -1
DDB1-223ENST00000543658 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
DDB1-223ENST00000543658 AMBPP02760 352 aa8.79□□□□□ -1
DDB1-223ENST00000543658 APOC4P55056 127 aa8.79□□□□□ -1
DDB1-223ENST00000543658 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
DDB1-223ENST00000543658 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
DDB1-223ENST00000543658 Q86TA4 180 aa8.79□□□□□ -1
DDB1-223ENST00000543658 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
DDB1-223ENST00000543658 C2CD4CQ8TF44 421 aa8.79□□□□□ -1
DDB1-223ENST00000543658 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
DDB1-223ENST00000543658 ZNF492Q9P255 531 aa8.79□□□□□ -1
DDB1-223ENST00000543658 LENEPQ9Y5L5 61 aa8.79□□□□□ -1
DDB1-223ENST00000543658 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
DDB1-223ENST00000543658 SRP19P09132 144 aaKnown RBP8.78□□□□□ -1
DDB1-223ENST00000543658 RPL35P42766 123 aaKnown RBP8.78□□□□□ -1
DDB1-223ENST00000543658 CDKN1BP46527 198 aa8.78□□□□□ -1
DDB1-223ENST00000543658 TAS2R60P59551 318 aa8.78□□□□□ -1
DDB1-223ENST00000543658 NDUFA5Q16718 116 aa8.78□□□□□ -1
DDB1-223ENST00000543658 DEFB121Q5J5C9 76 aa8.78□□□□□ -1
DDB1-223ENST00000543658 SAPCD1Q5SSQ6 148 aa8.78□□□□□ -1
DDB1-223ENST00000543658 Q8TAT8 98 aa8.78□□□□□ -1
DDB1-223ENST00000543658 CLUHP3Q96NS8 147 aa8.78□□□□□ -1
DDB1-223ENST00000543658 ODF3Q96PU9 254 aa8.78□□□□□ -1
DDB1-223ENST00000543658 CITED4Q96RK1 184 aa8.78□□□□□ -1
DDB1-223ENST00000543658 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
DDB1-223ENST00000543658 SLC35B3Q9H1N7 401 aa8.78□□□□□ -1
DDB1-223ENST00000543658 PARLQ9H300 379 aa8.78□□□□□ -1
DDB1-223ENST00000543658 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 J3KRW8 73 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 GNG4P50150 75 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 FXYD7P58549 80 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
DDB1-223ENST00000543658 SPINK13Q1W4C9 94 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 SMIM7Q9BQ49 75 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
DDB1-223ENST00000543658 TRBV7-9A0A0J9YWB2 115 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 TRBV6-1A0A0K0K1D8 114 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 A8MTW9 85 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 M0R2Z0 102 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 CA1P00915 261 aaPredicted RBP8.76□□□□□ -1.01
DDB1-223ENST00000543658 INSP01308 110 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 GPX1P07203 203 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 SFTA3P0C7M3 94 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 CENPWQ5EE01 88 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 SOHLH1Q5JUK2 328 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 BAGE2Q86Y30 109 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 MRAPQ8TCY5 172 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 DERL1Q9BUN8 251 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 CSTL1Q9H114 145 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 KLF12Q9Y4X4 402 aa8.76□□□□□ -1.01
DDB1-223ENST00000543658 FBN3Q75N90 2809 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 A8MZ25 164 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 K7EIL1 84 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 LTAP01374 205 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
DDB1-223ENST00000543658 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
DDB1-223ENST00000543658 KIR2DL5BQ8NHK3 375 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
DDB1-223ENST00000543658 RBMY1BA6NDE4 496 aaKnown RBP8.74□□□□□ -1.01
DDB1-223ENST00000543658 RBMY1EA6NEQ0 496 aaKnown RBP8.74□□□□□ -1.01
DDB1-223ENST00000543658 C9JCJ5 164 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 UBE2CO00762 179 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 RBMY1DP0C7P1 496 aaKnown RBP8.74□□□□□ -1.01
DDB1-223ENST00000543658 FRMD6-AS1P0C7T7 363 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 CRISP2P16562 243 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 AMTNQ6UX39 209 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 TMEM183AQ8IXX5 376 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 ASCL2Q99929 193 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms