RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GTF3C1Q12789 2109 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 VMO1Q7Z5L0 202 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 VGLL1Q99990 258 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 C7orf69Q9H7B7 122 aa15.49■□□□□ 0.07
SUDS3-204ENST00000543473 MRPL35Q9NZE8 188 aaKnown RBP15.49■□□□□ 0.07
SUDS3-204ENST00000543473 ITLN2Q8WWU7 325 aaPredicted RBP15.48■□□□□ 0.07
SUDS3-204ENST00000543473 PRR25Q96S07 402 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 TMEM14CQ9P0S9 112 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 ATP6V0BQ99437 205 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 ACACBO00763 2458 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 DUSP14O95147 198 aaKnown RBP15.48■□□□□ 0.07
SUDS3-204ENST00000543473 AMTNQ6UX39 209 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 C2orf66Q6UXQ4 117 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 DKK2Q9UBU2 259 aa15.48■□□□□ 0.07
SUDS3-204ENST00000543473 TRAV41A0A0B4J266 112 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 PPDPFLQ8WWR9 84 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 TRBV20-1A0A075B6N2 111 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 OOSP1A8MZH6 123 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 LTAP01374 205 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 SLC25A16P16260 332 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 GATA4P43694 442 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 IGFL3Q6UXB1 125 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 THAP8Q8NA92 274 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 RNF138Q8WVD3 245 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 ARHGAP21Q5T5U3 1957 aa15.47■□□□□ 0.07
SUDS3-204ENST00000543473 NDUFS7O75251 213 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 LINC00173Q6ZV60 143 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 CEND1Q8N111 149 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 TPSG1Q9NRR2 321 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 CACNA1AO00555 2505 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 RBMY1BA6NDE4 496 aaKnown RBP15.46■□□□□ 0.07
SUDS3-204ENST00000543473 RBMY1EA6NEQ0 496 aaKnown RBP15.46■□□□□ 0.07
SUDS3-204ENST00000543473 RBMY1DP0C7P1 496 aaKnown RBP15.46■□□□□ 0.07
SUDS3-204ENST00000543473 RBMY1A1P0DJD3 496 aaKnown RBP15.46■□□□□ 0.07
SUDS3-204ENST00000543473 RBMY1CP0DJD4 496 aa15.46■□□□□ 0.07
SUDS3-204ENST00000543473 TCF15Q12870 199 aa15.46■□□□□ 0.06
SUDS3-204ENST00000543473 MYMXA0A1B0GTQ4 84 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 KLF12Q9Y4X4 402 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 TRGV11A0A075B6L2 103 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 MALRD1Q5VYJ5 2156 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 FRMD6-AS1P0C7T7 363 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 PCP2Q8IVA1 136 aa15.45■□□□□ 0.06
SUDS3-204ENST00000543473 MINOS1Q5TGZ0 78 aa15.44■□□□□ 0.06
SUDS3-204ENST00000543473 MORN3Q6PF18 240 aaPredicted RBP15.44■□□□□ 0.06
SUDS3-204ENST00000543473 MINOS1-NBL1R4GNA1 71 aa15.44■□□□□ 0.06
SUDS3-204ENST00000543473 NCOA6Q14686 2063 aaPredicted RBP15.44■□□□□ 0.06
SUDS3-204ENST00000543473 SAP30O75446 220 aa15.44■□□□□ 0.06
SUDS3-204ENST00000543473 FAM120AOSQ5T036 256 aa15.44■□□□□ 0.06
SUDS3-204ENST00000543473 IGLC1P0CG04 106 aa15.44■□□□□ 0.06
SUDS3-204ENST00000543473 TAL2Q16559 108 aa15.43■□□□□ 0.06
SUDS3-204ENST00000543473 PRO3102Q9H379 93 aa15.43■□□□□ 0.06
SUDS3-204ENST00000543473 TRBV7-1A0A0A6YYK4 115 aa15.43■□□□□ 0.06
SUDS3-204ENST00000543473 H3BRN7 92 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 KRTAP27-1Q3LI81 207 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 A0A087WWL8 130 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 WT1P19544 449 aaPredicted RBP15.42■□□□□ 0.06
SUDS3-204ENST00000543473 TMEM219Q86XT9 240 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 F8VRH5 84 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 IL17RELQ6ZVW7 336 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 C11orf53Q8IXP5 236 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 Q8TCH9 128 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 PRADC1Q9BSG0 188 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 SPG11Q96JI7 2443 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 ALPK3Q96L96 1907 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 TRAV8-3A0A0A6YYJ7 113 aa15.42■□□□□ 0.06
SUDS3-204ENST00000543473 TP53TG1Q9Y2A0 90 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 OTOGLQ3ZCN5 2332 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 K7EM74 188 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 DTX2Q86UW9 622 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 SPXQ9BT56 116 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 TRAV26-2A0A0B4J265 109 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 TEX48A0A1B0GUV7 120 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 NDUFB8O95169 186 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 C12orf74Q32Q52 190 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 ARFGEF3Q5TH69 2177 aa15.41■□□□□ 0.06
SUDS3-204ENST00000543473 TAX1BP3O14907 124 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 DIAPH2-AS1Q14236 149 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 ANKRD39Q53RE8 183 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 LINC01545Q5VT33 79 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 LINC00311Q8N616 119 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 M0R1W7 72 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 TIMM21Q9BVV7 248 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 SCRT2Q9NQ03 307 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 FCN3O75636 299 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 EFNA4P52798 201 aa15.4■□□□□ 0.06
SUDS3-204ENST00000543473 LY6HO94772 140 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 DKK1O94907 266 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 IGHV3-73A0A0B4J1V6 119 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 COL8A2P25067 703 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 YPEL4Q96NS1 127 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 TRGV2A0A075B6R0 118 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 IGF2BP2-AS1Q96M15 143 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 PIEZO1Q92508 2521 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 IGLV1-44P01699 117 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 MORN5Q5VZ52 161 aa15.39■□□□□ 0.05
SUDS3-204ENST00000543473 HLA-DRB4P13762 266 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 HLA-DRB4X5D2U9 266 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 PTPRQQ9UMZ3 2332 aa15.38■□□□□ 0.05
SUDS3-204ENST00000543473 MED13Q9UHV7 2174 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms